Evidence map›Paper›PMID 29534758›Full record

ArticleMicrobial cell factories2018

TECS: a toxin expression control strategy as a tool for optimization of inducible promoters.

Aleksandra Małachowska, Paweł Olszewski

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Aleksandra MałachowskaDepartment of Genetics and Biosystematics, University of Gdańsk, ul. Wita Stwosza 59, 80-308, Gdańsk, Poland.
Paweł OlszewskiDepartment of Genetics and Biosystematics, University of Gdańsk, ul. Wita Stwosza 59, 80-308, Gdańsk, Poland. pawel.olszewski@biol.ug.edu.pl.ORCID http://orcid.org/0000-0002-2788-5254
University of Gdańsk · PL

Funding

Fundacja na rzecz Nauki Polskiej STARTNarodowe Centrum Nauki 2014/13/D/NZ1/00062
6 · The paper itself

Abstract

backgroundTranscriptional control of gene expression is a widely utilized regulatory mechanism in synthetic biology, biotechnology and recombinant protein production. It is achieved by utilization of naturally occurring promoters responding to nutrients or chemicals. Despite their regulatory properties, these promoters often possess features which diminish their utility for biotechnology. High basal expression level and low induction ratio can be removed using genetic engineering techniques, although this process is often laborious and time-consuming.

resultsIn order to facilitate optimization process for inducible promoters, we developed a simple method based on a conditional toxin expression which we abbreviate as toxin expression control strategy (TECS). In the presence of sucrose, SacB enzyme from Bacillus subtilis synthesizes levans which cause Eschericha coli cell lysis. However, in the absence of sucrose the enzyme does not affect the growth of the host. We utilized this feature to develop a two-step protocol allowing for efficient selection of inducible promoter variants. Using TECS we were able to modify the well-described p

conclusionsWe show that TECS is an efficient tool for optimization and development of inducible promoter systems in E. coli. Our strategy is very effective in the selection of promoter variants with improved properties. Its simplicity and short hands-on time make it an attractive method to optimize existing promoters and to construct novel, engineered genetic elements which improve properties of an inducible promoter system.

Indexed as

Gene ExpressionPromoter Regions, GeneticBacillus subtilisBacterial ToxinsEscherichia coliGenetic EngineeringMicroorganisms, Genetically-ModifiedRecombinant ProteinsSucroseSynthetic BiologyBacterial ToxinsRecombinant ProteinsSucroseConditional toxicityInducible promoterPromoter engineeringPromoter libraryPromoter optimization

Identifiers

PMID29534758
PMCPMC5851080
OpenAlexW2791588604

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.