Evidence map›Paper›PMID 29534724›Full record

ArticleBMC veterinary research2018

Association of Circulating Transfer RNA fragments with antibody response to Mycoplasma bovis in beef cattle.

Eduardo Casas, Guohong Cai, Larry A Kuehn, Karen B Register, Tara G McDaneld, John D Neill

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Eduardo CasasUSDA, ARS, National Animal Disease Center, Ames, IA, 50010, USA. Eduardo.casas@ARS.USDA.GOV.ORCID http://orcid.org/0000-0003-3773-4035
Guohong CaiUSDA, ARS, National Animal Disease Center, Ames, IA, 50010, USA.
Larry A KuehnUSDA, ARS, U.S. Meat Animal Research Center, Clay Center, NE, 68933, USA.
Karen B RegisterUSDA, ARS, National Animal Disease Center, Ames, IA, 50010, USA.
Tara G McDaneldUSDA, ARS, U.S. Meat Animal Research Center, Clay Center, NE, 68933, USA.
John D NeillUSDA, ARS, National Animal Disease Center, Ames, IA, 50010, USA.
National Animal Disease Center · USRoman L. Hruska U.S. Meat Animal Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHigh throughput sequencing allows identification of small non-coding RNAs. Transfer RNA Fragments are a class of small non-coding RNAs, and have been identified as being involved in inhibition of gene expression. Given their role, it is possible they may be involved in mediating the infection-induced defense response in the host. Therefore, the objective of this study was to identify 5' transfer RNA fragments (tRF5s) associated with a serum antibody response to M. bovis in beef cattle.

resultsThe tRF5s encoding alanine, glutamic acid, glycine, lysine, proline, selenocysteine, threonine, and valine were associated (P < 0.05) with antibody response against M. bovis. tRF5s encoding alanine, glutamine, glutamic acid, glycine, histidine, lysine, proline, selenocysteine, threonine, and valine were associated (P < 0.05) with season, which could be attributed to calf growth. There were interactions (P < 0.05) between antibody response to M. bovis and season for tRF5 encoding selenocysteine (anticodon UGA), proline (anticodon CGG), and glutamine (anticodon TTG). Selenocysteine is a rarely used amino acid that is incorporated into proteins by the opal stop codon (UGA), and its function is not well understood.

conclusionsDifferential expression of tRF5s was identified between ELISA-positive and negative animals. Production of tRF5s may be associated with a host defense mechanism triggered by bacterial infection, or it may provide some advantage to a pathogen during infection of a host. Further studies are needed to establish if tRF5s could be used as a diagnostic marker of chronic exposure.

Indexed as

AnimalsAntibody FormationCattleEnzyme-Linked Immunosorbent AssayMycoplasma bovisMycoplasma InfectionsRNA, Small UntranslatedRNA, TransferRNA, Small UntranslatedRNA, TransferCattleRNA-seqSelenocysteineSmall non-coding RNAtRF

Identifiers

PMID29534724
PMCPMC5851088
OpenAlexW2800593965

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.