Evidence map›Paper›PMID 29531336›Full record

ArticleJournal of human genetics2018

Molecular pathogenesis of interstitial cystitis based on microRNA expression signature: miR-320 family-regulated molecular pathways and targets.

Takayuki Arai, Miki Fuse, Yusuke Goto, Kanya Kaga, Akira Kurozumi, Yasutaka Yamada, Sho Sugawara, Atsushi Okato, Tomohiko Ichikawa, Tomonori Yamanishi and 1 more

Abstract read
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In one paragraph

Article in Journal of human genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
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  4. Article
  5. Article
  6. Article
  7. Review
  8. Biomarkers in the Light of the Etiopathology of IC/BPS.Diagnostics (Basel, Switzerland) · 2021
    Review
  9. Review
  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Takayuki AraiDepartment of Functional Genomics, Chiba University Graduate School of Medicine, Chiba, Japan.
Miki FuseDepartment of Urology, Continence Center, Dokkyo Medical University, Mibu, Tochigi, Japan.
Yusuke GotoDepartment of Functional Genomics, Chiba University Graduate School of Medicine, Chiba, Japan.
Kanya KagaDepartment of Urology, Continence Center, Dokkyo Medical University, Mibu, Tochigi, Japan.ORCID http://orcid.org/0000-0002-3183-5428
Akira KurozumiDepartment of Functional Genomics, Chiba University Graduate School of Medicine, Chiba, Japan.
Yasutaka YamadaDepartment of Functional Genomics, Chiba University Graduate School of Medicine, Chiba, Japan.
Sho SugawaraDepartment of Functional Genomics, Chiba University Graduate School of Medicine, Chiba, Japan.
Atsushi OkatoDepartment of Functional Genomics, Chiba University Graduate School of Medicine, Chiba, Japan.
Tomohiko IchikawaDepartment of Urology, Chiba University Graduate School of Medicine, Chiba, Japan.
Tomonori YamanishiDepartment of Urology, Continence Center, Dokkyo Medical University, Mibu, Tochigi, Japan.ORCID http://orcid.org/0000-0003-2040-7812
Naohiko SekiDepartment of Functional Genomics, Chiba University Graduate School of Medicine, Chiba, Japan. naoseki@faculty.chiba-u.jp.
Chiba University · JPDokkyo Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interstitial cystitis (IC), also known as bladder pain syndrome, is a chronic inflammatory disease that affects the bladder. The symptoms of IC vary, including feeling an urgent need for immediate urination and of needing to urinate often, as well as bladder or pelvic pain. Despite its high incidence, no molecular diagnostic methods are available for IC, and the molecular pathogenesis is unknown. microRNAs (miRNA) can regulate expression of RNA transcripts in cells and aberrant expression of miRNAs is associated with several human diseases. Here, we investigated the molecular pathogenesis of IC based on miRNA expression signatures. RNA sequencing of miRNA levels in IC tissues and comparison with levels in normal bladder tissue and bladder cancer revealed dysregulated expression of 366 miRNAs (203 and 163 down- and upregulated miRNAs, respectively). In particular, miR-320 family miRNAs(miR-320a, miR-320b, miR-320c, miR-320d and miR-320e) had downregulated expression in IC tissues. Genome-wide gene expression analyses and in silico database analyses showed that three transcription factors, E2F-1, E2F-2 and TUB, are regulated by miR-320 family miRNAs. Immunostaining of IC tissues confirmed that these transcription factors are overexpressed in IC tissues. Novel approaches that identify aberrantly expressed miRNA regulatory networks in IC could provide new prognostic markers and therapeutic targets for this disease.

Indexed as

Gene Expression RegulationGenetic Predisposition to DiseaseTranscriptomeBiomarkersCell LineComputational BiologyCystitis, InterstitialCystoscopesGene Expression ProfilingGenetic Association StudiesHigh-Throughput Nucleotide SequencingHumansImmunohistochemistryMicroRNAsMolecular Sequence AnnotationMultigene FamilyBiomarkersMicroRNAsMIRN320 microRNA, human

Identifiers

PMID29531336
OpenAlexW2885933649

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.