Evidence map›Paper›PMID 29530089›Full record

ArticleParasites & vectors2018

Transcriptome analysis of pig intestinal cell monolayers infected with Cryptosporidium parvum asexual stages.

Marzieh Ezzaty Mirhashemi, Farzad Noubary, Susan Chapman-Bonofiglio, Saul Tzipori, Gordon S Huggins, Giovanni Widmer

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 27 citations in OpenAlex.

  1. Exploring the repertoire of rhomboid proteases inFrontiers in cellular and infection microbiology · 2026
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  6. An update onJournal of parasitic diseases : official organ of the Indian Society for Parasitology · 2022
    Review
  7. IsFood and waterborne parasitology · 2022
    Article
  8. Article
  9. Proteome-wide prediction and analysis of theComputational and structural biotechnology journal · 2022
    Article
  10. Article
  11. Review
  12. Microorganisms · 2020
    Article
  13. Analysis of Long Non-Coding RNA inFrontiers in cellular and infection microbiology · 2020
    Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. ApiAP2 Transcription Factors in Apicomplexan Parasites.Pathogens (Basel, Switzerland) · 2019
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Marzieh Ezzaty MirhashemiClinical and Translational Institute, Sackler School of Biomedical Sciences, Tufts University, 136 Harrison Avenue, Boston, Massachusetts, 02111, USA.
Farzad NoubaryClinical and Translational Institute, Sackler School of Biomedical Sciences, Tufts University, 136 Harrison Avenue, Boston, Massachusetts, 02111, USA.
Susan Chapman-BonofiglioCummings School of Veterinary Medicine at Tufts University, Building 20, 200 Westborough Avenue, North Grafton, Massachusetts, 01536, USA.
Saul TziporiCummings School of Veterinary Medicine at Tufts University, Building 20, 200 Westborough Avenue, North Grafton, Massachusetts, 01536, USA.
Gordon S HugginsClinical and Translational Institute, Sackler School of Biomedical Sciences, Tufts University, 136 Harrison Avenue, Boston, Massachusetts, 02111, USA.
Giovanni WidmerCummings School of Veterinary Medicine at Tufts University, Building 20, 200 Westborough Avenue, North Grafton, Massachusetts, 01536, USA. giovanni.widmer@tufts.edu.
Tufts University · US

Funding

Tufts Clinical and Translational Research InstituteUL1TR001064 · NCATS · TUFTS UNIVERSITY BOSTON · PI SELKER, HARRY P. · 2013 to 2017
$26.4M
Tufts Clinical and Translational Research InstituteTL1TR001062 · NCATS · TUFTS UNIVERSITY BOSTON · PI SELKER, HARRY P. · 2013 to 2017
$2.1M
The role of host glycans in Cryptosporidium developmentR15AI122152 · NIAID · NORTH DAKOTA STATE UNIVERSITY · PI MCEVOY, JOHN M · 2016 to 2016
$483k
Towards the development of pro- and prebiotics against cryptosporidiosisR21AI125891 · NIAID · TUFTS UNIVERSITY BOSTON · PI WIDMER, GIOVANNI · 2017 to 2018
$454k
National Institute of Allergy and Infectious Diseases R15AI122152National Institute of Allergy and Infectious Diseases R21AI125891National Institute of Allergy and Infectious Diseases U19AI09776NCATS NIH HHS TL1 TR001062NCATS NIH HHS TL1TR001062NCATS NIH HHS UL1 TR001064NIAID NIH HHS R15 AI122152NIAID NIH HHS R21 AI125891
6 · The paper itself

Abstract

backgroundHuman cryptosporidiosis is caused primarily by two species of apicomplexan protozoa, Cryptosporidium parvum and C. hominis. In cultured cell monolayers, the parasite undergoes two generations of asexual multiplication (merogony). However, the proportion of parasites completing the life-cycle is low and insufficient to sustain continuous propagation. Due to the intracellular location of meronts and later life-cycle stages, oocyst and sporozoites are the only forms of the parasite that can readily be isolated.

resultsResearch on the replicating forms of Cryptosporidium parasites and their interaction with the host cell remains challenging. Based on an RNA-Seq analysis of monolayers of pig epithelial cells infected with C. parvum, here we report on the impact of merogony on the host's gene regulation. Analysis of the transcriptome of infected and uninfected monolayers demonstrates a significant impact of the infection on host cell gene expression. A total of 813 genes were differentially expressed. Functional terms significantly altered in response to infection include phosphoprotein, RNA binding and acetylation. Upregulation of cell cycle pathways indicates an increase in mitosis. Notably absent from differentially enriched functional categories are stress- and apoptosis-related functions. The comparison of the combined host-parasite transcriptome reveals that C. parvum gene expression is less diverse than the host cell transcriptome and is highly enriched for genes encoding ribosomal functions, such as ribosomal proteins.

conclusionsThese results indicate that C. parvum infection significantly changes host biological functions and provide new insight into gene functions driving early C. parvum intracellular development.

Indexed as

Gene Expression ProfilingAnimalsApoptosisCattleCell LineCells, CulturedCryptosporidiosisCryptosporidium parvumEpithelial CellsFecesGene Expression RegulationHost-Parasite InteractionsJejunumLife Cycle StagesMitosisOocystsRibosomal ProteinsRNA, ProtozoanCryptosporidium parvumRNA-SeqSus scrofaTranscriptome

Identifiers

PMID29530089
PMCPMC5848449
OpenAlexW2806180514

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.