Evidence map›Paper›PMID 29529714›Full record

ArticleMolecular genetics & genomic medicine2018

Analysis of mutations in EXT1 and EXT2 in Brazilian patients with multiple osteochondromas.

Savana C L Santos, Isabela M P O Rizzo, Reinaldo I Takata, Carlos E Speck-Martins, Jaime M Brum, Claudio Sollaci

Open access · goldAbstract read
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Article in Molecular genetics & genomic medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 20 citations in OpenAlex.

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  14. Mutational Analysis ofBioMed research international · 2021
    Article
  15. A mutation inBone & joint research · 2020
    Article
  16. Article
  17. Frontiers in genetics · 2020
    Article
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Savana C L SantosMolecular Pathology Laboratory, SARAH Network of Rehabilitation Hospitals, Brasília, Brazil.
Isabela M P O RizzoDepartment of Clinical Genetics, SARAH Network of Rehabilitation Hospitals, Brasília, Brazil.ORCID 0000-0001-8339-6837
Reinaldo I TakataMolecular Pathology Laboratory, SARAH Network of Rehabilitation Hospitals, Brasília, Brazil.
Carlos E Speck-MartinsDepartment of Clinical Genetics, SARAH Network of Rehabilitation Hospitals, Brasília, Brazil.
Jaime M BrumDepartment of Clinical Genetics, SARAH Network of Rehabilitation Hospitals, Brasília, Brazil.
Claudio SollaciDepartment of Orthopaedics, SARAH Network of Rehabilitation Hospitals, Brasília, Brazil.
Sarah Network of Rehabilitation Hospitals · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMultiple osteochondromas is a dysplasia characterized by growth of two or more osteochondromas. It is genetically heterogeneous, caused by pathogenic variants in EXT1 or EXT2 genes in 70%-90% of patients. The EXT1 is more often mutated than EXT2 gene, with a variable prevalence between populations. There are no data about EXT1 and EXT2 pathogenic variants in patients with multiple osteochondromas in Brazilian population. The aim of this survey is to characterize these to determine the genotype profile of this population.

methodsDNA sequencing (Sanger Method) and MLPA analysis were performed to identify point mutations and deletions/duplications in the sample of 153 patients in 114 families.

resultsGermline variants were identified in 83% of families in which EXT2 variants were detected in 46% and EXT1 in 37% of cases. No variants were detected in 17% of them. We identified 50 different variants, 33 (13 frameshift, 11 nonsense, 5 missense, 2 splice site mutation, and 2 large deletions) in EXT1 and 17 (6 frameshift, 6 splice site mutation, 3 nonsense, 1 missense, and 1 large deletion) in EXT2. Of all 50 variants, 31 (62%) were novel, including 20 out of 33 (60,6%) EXT1 and 11 out of 17 (64.7%) EXT2 alleles. The vast majority of variants (88%) were "loss-of-function" and two novel hotspots in EXT2 gene were observed in our study.

conclusionThe prevalence of variants detected in the EXT2 gene differs from other researches from Latin America, European, and Asian population. This uncommon prevalence could be related with the newly characterized variant hotspot sites detected in EXT2 gene (p.Ala409Profs*26 and p.Ser290*). A high number of novel variants were also identified indicating that Brazilian population has a unique genetic profile. Characterizing this population and establishing its genotype is essential to understand the molecular pathogenesis of this disease in Brazil.

Indexed as

AdolescentAdultAgedBase SequenceBrazilChildChild, PreschoolExonsExostoses, Multiple HereditaryExostosin 1Exostosin 2FemaleHumansMaleMiddle AgedMutationExostosin 1Exostosin 2N-AcetylglucosaminyltransferasesBrazilian populationchondrosarcomaEXT1EXT2genotypemultiple osteochondromas

Identifiers

PMID29529714
PMCPMC6014457
OpenAlexW2792226342

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.