Evidence map›Paper›PMID 29529046›Full record

ArticlePLoS genetics2018

Zinc transporters belonging to the Cation Diffusion Facilitator (CDF) family have complementary roles in transporting zinc out of the cytosol.

Sangyong Choi, Ya-Mei Hu, Mark E Corkins, Amy E Palmer, Amanda J Bird

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Metalation and activation of ZnBiophysics reviews · 2023
    Review
  7. Review
  8. Review
  9. Article
  10. Zinc at the Host-Fungus Interface: How to Uptake the Metal?Journal of fungi (Basel, Switzerland) · 2020
    Review
  11. Article
  12. Article
  13. Zinc homeostasis in the secretory pathway in yeast.Current opinion in chemical biology · 2020
    Review
  14. Transcription factors and transporters in zinc homeostasis: lessons learned from fungi.Critical reviews in biochemistry and molecular biology · 2020
    Review
  15. The intersection of host and fungus through the zinc lens.Current opinion in microbiology · 2019
    Review
  16. Article
  17. FRET Microscopy in Yeast.Biosensors · 2019
    Review
  18. Zinc-dependent activation of the Pho8 alkaline phosphatase inThe Journal of biological chemistry · 2019
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Sangyong ChoiDepartment of Human Nutrition, The Ohio State University, Columbus, Ohio, United States of America.ORCID 0000-0001-6316-7068
Ya-Mei HuDepartment of Human Nutrition, The Ohio State University, Columbus, Ohio, United States of America.
Mark E CorkinsDepartment of Molecular Genetics, The Ohio State University, Columbus, Ohio, United States of America.ORCID 0000-0001-8261-6025
Amy E PalmerDepartment of Chemistry and Biochemistry and BioFrontiers Institute, University of Colorado Boulder, Boulder, Colorado, United States of America.
Amanda J BirdDepartment of Human Nutrition, The Ohio State University, Columbus, Ohio, United States of America.ORCID 0000-0002-1846-7050
The Ohio State University · USUniversity of Colorado Boulder · US

Funding

Regulation of Cell Signaling by Transition Metal DynamicsDP1GM114863 · NIGMS · UNIVERSITY OF COLORADO · PI PALMER, AMY E · 2014 to 2018
$3.8M
Genetically Encoded Sensors Shed Light on Zinc HomeostasisR01GM084027 · NIGMS · UNIVERSITY OF COLORADO · PI PALMER, AMY E · 2008 to 2016
$2.6M
Zinc-dependent regulation of gene expressionR01GM105695 · NIGMS · OHIO STATE UNIVERSITY · PI BIRD, AMANDA JANE · 2014 to 2018
$1.4M
Typhoon FLA9500 Biomedical ImagerS10OD023582 · OD · OHIO STATE UNIVERSITY · PI JACKMAN, JANE ELIZABETH · 2017 to 2017
$144k
NIGMS NIH HHS DP1 GM114863NIGMS NIH HHS R01 GM084027NIGMS NIH HHS R01 GM105695NIH HHS GM084027NIH HHS S10 OD023582NIH HHS S10OD023582
6 · The paper itself

Abstract

Zinc is an essential trace element that is required for the function of a large number of proteins. As these zinc-binding proteins are found within the cytosol and organelles, all eukaryotes require mechanisms to ensure that zinc is delivered to organelles, even under conditions of zinc deficiency. Although many zinc transporters belonging to the Cation Diffusion Facilitator (CDF) families have well characterized roles in transporting zinc into the lumens of intracellular compartments, relatively little is known about the mechanisms that maintain organelle zinc homeostasis. The fission yeast Schizosaccharomyces pombe is a useful model system to study organelle zinc homeostasis as it expresses three CDF family members that transport zinc out of the cytosol into intracellular compartments: Zhf1, Cis4, and Zrg17. Zhf1 transports zinc into the endoplasmic reticulum, and Cis4 and Zrg17 form a heterodimeric complex that transports zinc into the cis-Golgi. Here we have used the high and low affinity ZapCY zinc-responsive FRET sensors to examine cytosolic zinc levels in yeast mutants that lack each of these CDF proteins. We find that deletion of cis4 or zrg17 leads to higher levels of zinc accumulating in the cytosol under conditions of zinc deficiency, whereas deletion of zhf1 results in zinc accumulating in the cytosol when zinc is not limiting. We also show that the expression of cis4, zrg17, and zhf1 is independent of cellular zinc status. Taken together our results suggest that the Cis4/Zrg17 complex is necessary for zinc transport out of the cytosol under conditions of zinc-deficiency, while Zhf1 plays the dominant role in removing zinc from the cytosol when labile zinc is present. We propose that the properties and/or activities of individual CDF family members are fine-tuned to enable cells to control the flux of zinc out of the cytosol over a broad range of environmental zinc stress.

Indexed as

Cation Transport ProteinsCell CompartmentationCytosolFluorescence Resonance Energy TransferHomeostasisIon TransportMembrane Transport ProteinsMutationOrganellesSchizosaccharomycesSchizosaccharomyces pombe ProteinsZincCation Transport ProteinsCis4 protein, S pombeMembrane Transport ProteinsSchizosaccharomyces pombe ProteinsZhf1 protein, S pombeZinc

Identifiers

PMID29529046
PMCPMC5864093
OpenAlexW2794075410

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.