Evidence map›Paper›PMID 29528243›Full record

ArticleEpigenomics2018

Untargeted metabolomics reveals multiple metabolites influencing smoking-related DNA methylation.

Yunfeng Huang, Qin Hui, Douglas I Walker, Karan Uppal, Jack Goldberg, Dean P Jones, Viola Vaccarino, Yan V Sun

Abstract readTwin Study
In one paragraph

Article in Epigenomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. DNA Methylation of TXNIP Independently Associated with Inflammation and Diabetes Mellitus in Twins.Twin research and human genetics : the official journal of the International Society for Twin Studies · 2021
    Article
  4. Article
  5. Article
  6. Review
  7. PepT1-knockout mice harbor a protective metabolome beneficial for intestinal wound healing.American journal of physiology. Gastrointestinal and liver physiology · 2021
    Article
  8. Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yunfeng HuangDepartment of Epidemiology, Emory University Rollins School of Public Health, Atlanta, GA 30322, USA.
Qin HuiDepartment of Epidemiology, Emory University Rollins School of Public Health, Atlanta, GA 30322, USA.
Douglas I WalkerDepartment of Medicine, Division of Pulmonary, Allergy & Critical Care Medicine, Emory University School of Medicine, Atlanta, GA 30322, USA.
Karan UppalDepartment of Medicine, Division of Pulmonary, Allergy & Critical Care Medicine, Emory University School of Medicine, Atlanta, GA 30322, USA.
Jack GoldbergVietnam Era Twin Registry, VA Epidemiologic Research & Information Center & Department of Epidemiology, University of Washington School of Public Health, Seattle, WA 98195, USA.
Dean P JonesDepartment of Medicine, Division of Pulmonary, Allergy & Critical Care Medicine, Emory University School of Medicine, Atlanta, GA 30322, USA.
Viola VaccarinoDepartment of Epidemiology, Emory University Rollins School of Public Health, Atlanta, GA 30322, USA.
Yan V SunDepartment of Epidemiology, Emory University Rollins School of Public Health, Atlanta, GA 30322, USA.
Emory University · USSeattle Epidemiologic Information and Research Center · US

Funding

IRACDA Fellowships in Research and Science Training (FIRST)K12GM000680 · NIGMS · EMORY UNIVERSITY · PI BROWN, LOU ANN S, MCCARTY, NAEL A · 2000 to 2024
$41.2M
Pilot Project ProgramP30ES019776 · NIEHS · EMORY UNIVERSITY · PI William Michael Caudle · 2013 to 2026
$22.6M
X LINKED NYSTAGMUS SYNDROME WITH FEATURES OF ALBINISMM01RR000039 · NCRR · EMORY UNIVERSITY · PI QUYYUMI, ARSHED A · 1985 to 2007
$21.3M
Neural Circuits in Women with Abuse and PTSDR01MH056120 · NIMH · YALE UNIVERSITY · PI BREMNER, JAMES DOUGLAS · 1999 to 2011
$5.0M
Mechanisms Linking Depression to Cardiovascular RiskR01HL068630 · NHLBI · EMORY UNIVERSITY · PI VACCARINO, VIOLA · 2001 to 2010
$4.8M
Intergenerational Impact of Genetic and Psychological Factors on Blood PressureR01NR013520 · NINR · YALE UNIVERSITY · PI TAYLOR, JACQUELYN Y · 2014 to 2019
$3.9M
Posttraumatic Stress Disorder and Cardiovascular DiseaseR01AG026255 · NIA · EMORY UNIVERSITY · PI VACCARINO, VIOLA · 2004 to 2007
$2.8M
Mechanisms of Depression in CVDR01HL088726 · NHLBI · EMORY UNIVERSITY · PI BREMNER, JAMES DOUGLAS · 2008 to 2012
$2.6M
Mind-Body Interactions in Cardiovascular DiseaseK24HL077506 · NHLBI · EMORY UNIVERSITY · PI VACCARINO, VIOLA · 2004 to 2013
$1.5M
Biological Correlates of Traumatic StressK24MH076955 · NIMH · EMORY UNIVERSITY · PI BREMNER, JAMES DOUGLAS · 2006 to 2013
$946k
Identification of genetic and metabolomic markers influencing dystoniaR21NS096455 · NINDS · EMORY UNIVERSITY · PI JINNAH, HYDER A, SUN, YAN · 2016 to 2017
$429k
NCRR NIH HHS M01 RR000039NHLBI NIH HHS K24 HL077506NHLBI NIH HHS R01 HL068630NHLBI NIH HHS R01 HL088726NIA NIH HHS R01 AG026255NIEHS NIH HHS P30 ES019776NIGMS NIH HHS K12 GM000680NIMH NIH HHS K24 MH076955NIMH NIH HHS R01 MH056120NINDS NIH HHS R21 NS096455NINR NIH HHS R01 NR013520
6 · The paper itself

Abstract

aimWe conducted a joint metabolomic-epigenomic study to identify patterns of epigenetic associations with smoking-related metabolites. PATIENTS &

methodsWe performed an untargeted metabolome-wide association study of smoking and epigenome-wide association studies of smoking-related metabolites among 180 male twins. We examined the patterns of epigenetic association linked to smoking-related metabolites using hierarchical clustering.

resultsAmong 12 annotated smoking-related metabolites identified from a metabolome-wide association study, we observed significant hypomethylation associated with increased level of N-acetylpyrrolidine, cotinine, 5-hydroxycotinine and nicotine and hypermethylation associated with increased level of 8-oxoguanine. Hierarchical clustering revealed common and unique epigenetic-metabolic associations related to smoking.

conclusionOur study suggested that a joint metabolome-epigenome approach can reveal additional details in molecular responses to the environmental exposure to understand disease risk.

Indexed as

DNA MethylationCpG IslandsEpigenesis, GeneticGenetic Association StudiesHumansMaleMetabolomicsMiddle AgedSmokingepigenetic epidemiologyepigeneticsepigenomeEWASexposomemetabolomemetabolome-wide association studymethylometwin

Identifiers

PMID29528243
PMCPMC5925442
OpenAlexW2791115778

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.