Evidence map›Paper›PMID 29524612›Full record

ArticleBiochimica et biophysica acta. Gene regulatory mechanisms2018

Transcriptional regulation mediated by H2A.Z via ANP32e-dependent inhibition of protein phosphatase 2A.

Hyewon Shin, Minzhen He, Zhi Yang, Yong Heui Jeon, Jessica Pfleger, Danish Sayed, Maha Abdellatif

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. Gene regulatory mechanisms, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
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  9. Article
  10. The histone variant H2A.Z in gene regulation.Epigenetics & chromatin · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Hyewon ShinDepartment of Cellular Biology and Molecular Medicine, Rutgers University-New Jersey Medical School, Newark, NJ 07103, United States.
Minzhen HeDepartment of Cellular Biology and Molecular Medicine, Rutgers University-New Jersey Medical School, Newark, NJ 07103, United States.
Zhi YangDepartment of Cellular Biology and Molecular Medicine, Rutgers University-New Jersey Medical School, Newark, NJ 07103, United States.
Yong Heui JeonDepartment of Cellular Biology and Molecular Medicine, Rutgers University-New Jersey Medical School, Newark, NJ 07103, United States.
Jessica PflegerDepartment of Cellular Biology and Molecular Medicine, Rutgers University-New Jersey Medical School, Newark, NJ 07103, United States.
Danish SayedDepartment of Cellular Biology and Molecular Medicine, Rutgers University-New Jersey Medical School, Newark, NJ 07103, United States.
Maha AbdellatifDepartment of Cellular Biology and Molecular Medicine, Rutgers University-New Jersey Medical School, Newark, NJ 07103, United States. Electronic address: abdellma@njms.rutgers.edu.
Rutgers, The State University of New Jersey · US

Funding

Role of Negative Elongation Factor Complex in RNA polymerase II pausing and gene transcription in HeartR01HL150059 · NHLBI · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI SAYED, DANISH · 2021 to 2025
$2.9M
NOVEL POSTTRANSCRIPTIONAL REGULATORS OF STRESS HORMONE GLUCOCORTICOID RECEPTOR–DEPENDENT GENE TRANSCRIPTION DURING CARDIAC HYPERTROPHY AND FAILURER01HL128799 · NHLBI · RBHS-NEW JERSEY MEDICAL SCHOOL · PI SAYED, DANISH · 2016 to 2020
$2.0M
The role of Complex II in heart failureR01HL137351 · NHLBI · RBHS-NEW JERSEY MEDICAL SCHOOL · PI ABDELLATIF, MAHA · 2017 to 2020
$1.6M
Mechanisms in transcriptional regulation during cardiac hypertrophyR01HL119726 · NHLBI · RBHS-NEW JERSEY MEDICAL SCHOOL · PI ABDELLATIF, MAHA · 2013 to 2016
$1.6M
NHLBI NIH HHS R01 HL119726NHLBI NIH HHS R01 HL128799NHLBI NIH HHS R01 HL137351NHLBI NIH HHS R01 HL150059
6 · The paper itself

Abstract

The mechanisms that regulate H2A.Z and its requirement for transcription in differentiated mammalian cells remains ambiguous. In this study, we identified the interaction between the C-terminus of ANP32e and N-terminus of H2A.Z in a yeast two-hybrid screen. Knockdown of ANP32e resulted in proteasomal degradation and nuclear depletion of H2A.Z or of a chimeric green florescence protein fused to its N-terminus. This effect was reversed by inhibition of protein phosphatase 2A (PP2A) and, conversely, reproduced by overexpression of its catalytic subunit. Accordingly, knockdown of ANP32e inhibited phosphorylation of H2A.Z, whereas a mutation of serine-9 proved its requirement for both the protein's stability and nuclear localization, as did knockdown of the nuclear mitogen and stress-induced kinase 1. Moreover, ANP32e's knockdown also revealed its differential requirement for cell signaling and gene expression, whereas, genome-wide binding analysis confirmed its co-localization with H2A.Z at transcription start sites, as well as, gene bodies of inducible and tissue-specific genes. The data also suggest that H2A.Z restricts transcription, which is moderated by ANP32e at the promoter and gene bodies of expressed genes. Thus, ANP32e, through inhibition of PP2A, is required for nucleosomal inclusion of H2A.Z and the regulation of gene expression.

Indexed as

Transcription, GeneticAmino Acid SequenceCell NucleusGene Expression RegulationGene Knockdown TechniquesHistonesHumansMolecular ChaperonesNerve Tissue ProteinsNucleosomesPromoter Regions, GeneticProtein Phosphatase 2Saccharomyces cerevisiaeTranscription Initiation SiteAnp32e protein, mouseH2az1 protein, mouseHistonesMolecular ChaperonesNerve Tissue ProteinsNucleosomesProtein Phosphatase 2Chromatin immunoprecipitationHistoneMSK1Yeast two-hybrid

Identifiers

PMID29524612
PMCPMC6053077
OpenAlexW2749711468

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.