Evidence map›Paper›PMID 29523997›Full record

ArticleJournal of industrial microbiology & biotechnology2018

Production of pikromycin using branched chain amino acid catabolism in Streptomyces venezuelae ATCC 15439.

Jeong Sang Yi, Minsuk Kim, Eun-Jung Kim, Byung-Gee Kim

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Improving the production of natamycin inFood science and biotechnology · 2024
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. WblA, a global regulator of antibiotic biosynthesis in Streptomyces.Journal of industrial microbiology & biotechnology · 2021
    Review
  11. Article
  12. Article
  13. The Onset of Tacrolimus Biosynthesis inAntibiotics (Basel, Switzerland) · 2020
    Article
  14. Synthetic biology enabling access to designer polyketides.Current opinion in chemical biology · 2020
    Review
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jeong Sang YiSchool of Chemical and Biological Engineering, Seoul National University, 1, Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea.
Minsuk KimInstitute of Engineering Research, Seoul National University, Seoul, 08826, Republic of Korea.
Eun-Jung KimInstitute of Molecular Biology and Genetics, Seoul National University, Seoul, 08826, Republic of Korea.
Byung-Gee KimSchool of Chemical and Biological Engineering, Seoul National University, 1, Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea. byungkim@snu.ac.kr.ORCID http://orcid.org/0000-0002-3776-1001
Seoul National University · KR

Funding

Ministry of Science, ICT and Future Planning 2016953757
6 · The paper itself

Abstract

Branched chain amino acids (BCAA) are catabolized into various acyl-CoA compounds, which are key precursors used in polyketide productions. Because of that, BCAA catabolism needs fine tuning of flux balances for enhancing the production of polyketide antibiotics. To enhance BCAA catabolism for pikromycin production in Streptomyces venezuelae ATCC 15439, three key enzymes of BCAA catabolism, 3-ketoacyl acyl carrier protein synthase III, acyl-CoA dehydrogenase, and branched chain α-keto acid dehydrogenase (BCDH) were manipulated. BCDH overexpression in the wild type strain resulted in 1.3 fold increase in pikromycin production compared to that of WT, resulting in total 25 mg/L of pikromycin. To further increase pikromycin production, methylmalonyl-CoA mutase linked to succinyl-CoA production was overexpressed along with BCDH. Overexpression of the two enzymes resulted in the highest titer of total macrolide production of 43 mg/L, which was about 2.2 fold increase compared to that of the WT. However, it accumulated and produced dehydroxylated forms of pikromycin and methymycin, including their derivatives as well. It indicated that activities of pikC, P450 monooxygenase, newly became a bottleneck in pikromycin synthesis.

Indexed as

Amino Acids, Branched-ChainAnti-Bacterial AgentsHydroxylationMacrolidesSecondary MetabolismStreptomycesAmino Acids, Branched-ChainAnti-Bacterial AgentsMacrolidespicromycinMethylmalonyl-CoAPikromycinStreptomyces venezuelae

Identifiers

PMID29523997
OpenAlexW2792308146

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.