Evidence map›Paper›PMID 29523971›Full record

ArticleJournal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry2018

Emission of volatile halogenated compounds, speciation and localization of bromine and iodine in the brown algal genome model Ectocarpus siliculosus.

Frithjof C Küpper, Eric P Miller, Stephen J Andrews, Claire Hughes, Lucy J Carpenter, Wolfram Meyer-Klaucke, Chiaki Toyama, Yasuyuki Muramatsu, Martin C Feiters, Carl J Carrano

Open access · hybridAbstract read
PubMed Publisher
In one paragraph

Article in Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Alleviative Effect of Iodine Pretreatment on the Stress ofInternational journal of molecular sciences · 2023
    Article
  3. Microbial involvement in iodine cycle: mechanisms and potential applications.Frontiers in bioengineering and biotechnology · 2023
    Review
  4. Review
  5. Alison Butler: papers in celebration of her 2018 ACS Alfred Bader Award in Bioorganic or Bioinorganic Chemistry.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2021
    Article
  6. Production of Methyl-Iodide in the Environment.Frontiers in microbiology · 2021
    Review
  7. Article
  8. Article
  9. Census of halide-binding sites in protein structures.Bioinformatics (Oxford, England) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 5 countries.

Frithjof C KüpperOceanlab, University of Aberdeen, Main Street, Newburgh, AB41 6AA, Scotland, UK. fkuepper@abdn.ac.uk.
Eric P MillerDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA, 92182-1030, USA.
Stephen J AndrewsWolfson Atmospheric Chemistry Laboratories, Department of Chemistry, University of York, York, YO10 5DD, UK.
Claire HughesEnvironment Department, University of York, York, YO10 5NG, UK.
Lucy J CarpenterWolfson Atmospheric Chemistry Laboratories, Department of Chemistry, University of York, York, YO10 5DD, UK.
Wolfram Meyer-KlauckeDepartment of Chemistry - Inorganic Chemistry, Faculty of Science, University of Paderborn, Warburger Strasse 100, 33098, Paderborn, Germany.
Chiaki ToyamaGeological Survey of Japan, The National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, 305-8567, Japan.
Yasuyuki MuramatsuDepartment of Chemistry, Faculty of Science, Gakushuin University, Toshima-Ku, Tokyo, 171-8588, Japan.
Martin C FeitersDepartment of Organic Chemistry, Institute for Molecules and Materials, Radboud University Nijmegen, Heyendaalseweg 135, 6525 AJ, Nijmegen, The Netherlands.
Carl J CarranoDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA, 92182-1030, USA.
University of York · GBSan Diego State University · USAberdeenshire Council · GBGakushuin University · JPNational Institute of Advanced Industrial Science and Technology · JPPaderborn University · DERadboud University Nijmegen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study explores key features of bromine and iodine metabolism in the filamentous brown alga and genomics model Ectocarpus siliculosus. Both elements are accumulated in Ectocarpus, albeit at much lower concentration factors (2-3 orders of magnitude for iodine, and < 1 order of magnitude for bromine) than e.g. in the kelp Laminaria digitata. Iodide competitively reduces the accumulation of bromide. Both iodide and bromide are accumulated in the cell wall (apoplast) of Ectocarpus, with minor amounts of bromine also detectable in the cytosol. Ectocarpus emits a range of volatile halogenated compounds, the most prominent of which by far is methyl iodide. Interestingly, biosynthesis of this compound cannot be accounted for by vanadium haloperoxidase since the latter have not been found to catalyze direct halogenation of an unactivated methyl group or hydrocarbon so a methyl halide transferase-type production mechanism is proposed.

Indexed as

BromineHalogenationHydrocarbons, HalogenatedIodinePhaeophyceaeVolatile Organic CompoundsBromineHydrocarbons, HalogenatedIodineVolatile Organic CompoundsEnergy-dispersive X-ray analysisHalocarbonsMethyl iodidePhaeophytaX-ray absorption spectroscopy

Identifiers

PMID29523971
OpenAlexW2788186191

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.