Evidence map›Paper›PMID 29523856›Full record

ArticleScientific reports2018

Expanding the toolbox for cryopreservation of marine and freshwater diatoms.

Willem Stock, Eveline Pinseel, Sam De Decker, Josefin Sefbom, Lander Blommaert, Olga Chepurnova, Koen Sabbe, Wim Vyverman

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Effects of Cryopreservation on Microparticles Concentration, Procoagulant Function, Size Distribution, and Morphology.Medical science monitor : international medical journal of experimental and clinical research · 2019
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Willem StockLaboratory of Protistology and Aquatic Ecology, Ghent University, Krijgslaan 281-S8, B-9000, Ghent, Belgium.
Eveline PinseelLaboratory of Protistology and Aquatic Ecology, Ghent University, Krijgslaan 281-S8, B-9000, Ghent, Belgium.
Sam De DeckerLaboratory of Protistology and Aquatic Ecology, Ghent University, Krijgslaan 281-S8, B-9000, Ghent, Belgium.
Josefin SefbomLaboratory of Protistology and Aquatic Ecology, Ghent University, Krijgslaan 281-S8, B-9000, Ghent, Belgium.
Lander BlommaertLaboratory of Protistology and Aquatic Ecology, Ghent University, Krijgslaan 281-S8, B-9000, Ghent, Belgium.
Olga ChepurnovaLaboratory of Protistology and Aquatic Ecology, Ghent University, Krijgslaan 281-S8, B-9000, Ghent, Belgium.
Koen SabbeLaboratory of Protistology and Aquatic Ecology, Ghent University, Krijgslaan 281-S8, B-9000, Ghent, Belgium.
Wim VyvermanLaboratory of Protistology and Aquatic Ecology, Ghent University, Krijgslaan 281-S8, B-9000, Ghent, Belgium. wim.vyverman@ugent.be.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diatoms constitute the most diverse group of microalgae and have long been recognised for their large biotechnological potential. In the wake of growing research interest in new model species and development of commercial applications, there is a pressing need for long-term preservation of diatom strains. While cryopreservation using dimethylsulfoxide (DMSO) as a cryoprotective agent is the preferred method for long-term strain preservation, many diatom species cannot be successfully cryopreserved using DMSO. Therefore, in this study, we studied cryopreservation success in six different diatom species, representing the major morphological and ecological diatom groups, using a range of DMSO concentrations and Plant Vitrification Solution 2 (PVS2) as an alternative cryoprotectant to DMSO. In addition, we tested whether suppressing bacterial growth by antibiotics accelerates the post-thaw recovery process. Our results show that the effects of cryoprotectant choice, its concentration and the addition of antibiotics are highly species specific. In addition, we showed that PVS2 and antibiotics are useful agents to optimize cryopreservation of algae that cannot survive the traditional cryopreservation protocol using DMSO. We conclude that a species-specific approach will remain necessary to develop protocols for diatom cryopreservation and to increase their representation in public culture collections.

Indexed as

CryopreservationCryoprotective AgentsDiatomsDimethyl SulfoxideCryoprotective AgentsDimethyl Sulfoxide

Identifiers

PMID29523856
PMCPMC5844899

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.