Evidence map›Paper›PMID 29523818›Full record

ArticleScientific reports2018

Reactive oxygen species stress increases accumulation of tyrosyl-DNA phsosphodiesterase 1 within mitochondria.

Hok Khim Fam, Kunho Choi, Lauren Fougner, Chinten James Lim, Cornelius F Boerkoel

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hok Khim FamBC Children's Hospital Research Institute, University of British Columbia, Vancouver, Canada.
Kunho ChoiBC Children's Hospital Research Institute, University of British Columbia, Vancouver, Canada.
Lauren FougnerBC Children's Hospital Research Institute, University of British Columbia, Vancouver, Canada.
Chinten James LimBC Children's Hospital Research Institute, University of British Columbia, Vancouver, Canada.ORCID 0000-0001-6381-7585
Cornelius F BoerkoelBC Children's Hospital Research Institute, University of British Columbia, Vancouver, Canada. cboerkoel@gmail.com.
University of British Columbia · CA

Funding

CIHR 248178
6 · The paper itself

Abstract

Tyrosyl-DNA phosphodiesterase 1 (Tdp1) is a nuclear and mitochondrial protein that in nuclei and in vitro repairs blocked 3' DNA termini such as 3' phosphotyrosine conjugates resulting from stalling of topoisomerase I-DNA intermediates. Its mutation also causes spinocerebellar ataxia with axonal neuropathy type 1 (SCAN1). Because Tdp1 colocalizes with mitochondria following oxidative stress, we hypothesized that Tdp1 repairs mitochondrial DNA (mtDNA) and that mtDNA damage mediates entry of Tdp1 into the mitochondria. To test this, we used S. cerevisiae mutants, cultured mouse and human cells, and a Tdp1 knockout mouse. H

Indexed as

Oxidative StressActive Transport, Cell NucleusAnimalsCell LineCell NucleusCell RespirationCells, CulturedHumansMiceMitochondriaMitogen-Activated Protein Kinase 3p38 Mitogen-Activated Protein KinasesPhosphoric Diester HydrolasesReactive Oxygen SpeciesSaccharomyces cerevisiaeMitogen-Activated Protein Kinase 3p38 Mitogen-Activated Protein KinasesPhosphoric Diester HydrolasesReactive Oxygen SpeciesTDP1 protein, human

Identifiers

PMID29523818
PMCPMC5844879
OpenAlexW2806959851

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.