Evidence map›Paper›PMID 29523684›Full record

ArticleThe Journal of biological chemistry2018

Acute loss of iron-sulfur clusters results in metabolic reprogramming and generation of lipid droplets in mammalian cells.

Daniel R Crooks, Nunziata Maio, Andrew N Lane, Michal Jarnik, Richard M Higashi, Ronald G Haller, Ye Yang, Teresa W-M Fan, W Marston Linehan, Tracey A Rouault

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 103 citations in OpenAlex.

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  5. Metabolic and imaging phenotypes associated withbioRxiv : the preprint server for biology · 2025
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  7. Why cells need iron: a compendium of iron utilisation.Trends in endocrinology and metabolism: TEM · 2024
    Review
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  13. CIAO1 and MMS19 deficiency: A lethal neurodegenerative phenotype caused by cytosolic Fe-S cluster protein assembly disorders.Genetics in medicine : official journal of the American College of Medical Genetics · 2024
    Article
  14. Article
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  16. Iron promotes glycolysis to drive colon tumorigenesis.Biochimica et biophysica acta. Molecular basis of disease · 2023
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  19. Adenylosuccinic Acid: An Orphan Drug with Untapped Potential.Pharmaceuticals (Basel, Switzerland) · 2023
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  20. Review

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Daniel R CrooksUrologic Oncology Branch, Center for Cancer Research, NCI, National Institutes of Health, Bethesda, Maryland 20892.
Nunziata MaioSection on Human Iron Metabolism, National Institutes of Health, Bethesda, Maryland 20892.
Andrew N LaneCenter for Environmental and Systems Biochemistry, Department of Toxicology and Cancer Biology, and Markey Cancer Center, University of Kentucky, Lexington, Kentucky 40536.
Michal JarnikSection on Cell Biology and Metabolism, Eunice Kennedy Shriver NICHD, National Institutes of Health, Bethesda, Maryland 20892.
Richard M HigashiCenter for Environmental and Systems Biochemistry, Department of Toxicology and Cancer Biology, and Markey Cancer Center, University of Kentucky, Lexington, Kentucky 40536.
Ronald G HallerDepartment of Neurology, University of Texas Southwestern Medical Center, Dallas, Texas 75390; Veterans Affairs North Texas Medical Center, Dallas, Texas 75216; Neuromuscular Center, Institute for Exercise and Environmental Medicine, Dallas, Texas 75231.
Ye YangUrologic Oncology Branch, Center for Cancer Research, NCI, National Institutes of Health, Bethesda, Maryland 20892.
Teresa W-M FanCenter for Environmental and Systems Biochemistry, Department of Toxicology and Cancer Biology, and Markey Cancer Center, University of Kentucky, Lexington, Kentucky 40536.
W Marston LinehanUrologic Oncology Branch, Center for Cancer Research, NCI, National Institutes of Health, Bethesda, Maryland 20892.
Tracey A RouaultSection on Human Iron Metabolism, National Institutes of Health, Bethesda, Maryland 20892. Electronic address: rouault@mail.nih.gov.
National Institutes of Health · USCenter for Cancer Research · USMarkey Cancer Center · USUniversity of Kentucky · USVeterans Health Administration · US

Funding

University of Kentucky Markey Cancer Center Support Grant ECIA SupplementP30CA177558 · NCI · UNIVERSITY OF KENTUCKY · PI KATHLEEN L. O'CONNOR · 2013 to 2026
$38.3M
Molecular Therapeutics of Kidney Cancer: VHL Gene and Fumarate Hydratase GeneZIABC011038 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LINEHAN, WILLIAM MARSTON · 2009 to 2025
$29.8M
Regulation Of Intracellular Iron MetabolismZIAHD001602 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI ROUAULT, TRACEY A. · 2009 to 2025
$21.8M
Mammalian iron-sulfur cluster biogenesisZIAHD008814 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI ROUAULT, TRACEY A. · 2009 to 2025
$17.8M
SAMPLE COREU24DK097215 · NIDDK · UNIVERSITY OF KENTUCKY · PI FAN, TERESA WHEI-MEI, HIGASHI, RICHARD M · 2013 to 2017
$8.7M
Integrated Chemoselective and Informatic Platform for Large-Scale MetabolomicsR01ES022191 · NIEHS · UNIVERSITY OF LOUISVILLE · PI FAN, TERESA WHEI-MEI, HIGASHI, RICHARD M · 2012 to 2016
$3.4M
Exercise adaptations in mitochondrial myopathy: therapeutic implicationsR01AR050597 · NIAMS · UT SOUTHWESTERN MEDICAL CENTER · PI HALLER, RONALD G · 2006 to 2012
$2.6M
Algorithms for Accurate and Scalable Identification of Isotopologues from Mass Spectrometry DataR03CA222449 · NCI · UNIVERSITY OF KENTUCKY · PI HIGASHI, RICHARD M, LIU, JINZE · 2017 to 2017
$153k
NCI NIH HHS P30 CA177558NCI NIH HHS R03 CA222449NIAMS NIH HHS R01 AR050597NIDDK NIH HHS U24 DK097215NIEHS NIH HHS R01 ES022191
6 · The paper itself

Abstract

Iron-sulfur (Fe-S) clusters are ancient cofactors in cells and participate in diverse biochemical functions, including electron transfer and enzymatic catalysis. Although cell lines derived from individuals carrying mutations in the Fe-S cluster biogenesis pathway or siRNA-mediated knockdown of the Fe-S assembly components provide excellent models for investigating Fe-S cluster formation in mammalian cells, these experimental strategies focus on the consequences of prolonged impairment of Fe-S assembly. Here, we constructed and expressed dominant-negative variants of the primary Fe-S biogenesis scaffold protein iron-sulfur cluster assembly enzyme 2 (ISCU2) in human HEK293 cells. This approach enabled us to study the early metabolic reprogramming associated with loss of Fe-S-containing proteins in several major cellular compartments. Using multiple metabolomics platforms, we observed a ∼12-fold increase in intracellular citrate content in Fe-S-deficient cells, a surge that was due to loss of aconitase activity. The excess citrate was generated from glucose-derived acetyl-CoA, and global analysis of cellular lipids revealed that fatty acid biosynthesis increased markedly relative to cellular proliferation rates in Fe-S-deficient cells. We also observed intracellular lipid droplet accumulation in both acutely Fe-S-deficient cells and iron-starved cells. We conclude that deficient Fe-S biogenesis and acute iron deficiency rapidly increase cellular citrate concentrations, leading to fatty acid synthesis and cytosolic lipid droplet formation. Our findings uncover a potential cause of cellular steatosis in nonadipose tissues.

Indexed as

Cellular ReprogrammingAconitate HydrataseEnergy MetabolismHEK293 CellsHumansIronIron-Sulfur ProteinsLipid DropletsMetabolic Networks and PathwaysMitochondriaSulfurAconitate HydrataseIronIron-Sulfur ProteinsISCU protein, humanSulfurcell metabolismfatty acid biosynthesisfatty acid metabolismiron deficiencyiron, Fe-S clustersiron metabolismiron-sulfur proteinlipid synthesislipoic acidmetabolic reprogrammingmetabolomicsmitochondriamitochondrial diseasesteatosis

Identifiers

PMID29523684
PMCPMC5971457
OpenAlexW2793630235

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.