Evidence map›Paper›PMID 29522514›Full record

ArticlePLoS computational biology2018

Use of temperature to improve West Nile virus forecasts.

Nicholas B DeFelice, Zachary D Schneider, Eliza Little, Christopher Barker, Kevin A Caillouet, Scott R Campbell, Dan Damian, Patrick Irwin, Herff M P Jones, John Townsend and 1 more

Abstract read
In one paragraph

Article in PLoS computational biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Nicholas B DeFeliceDepartment of Environmental Health Sciences, Mailman School of Public Health, Columbia University, New York, New York, United States of America.ORCID 0000-0003-3551-6587
Zachary D SchneiderDepartment of Epidemiology, Mailman School of Public Health, Columbia University, New York, New York, United States of America.
Eliza LittleDepartment of Environmental Health Sciences, Mailman School of Public Health, Columbia University, New York, New York, United States of America.ORCID 0000-0002-1603-7161
Christopher BarkerCenter for Vectorborne Diseases, University of California Davis, Davis, California.ORCID 0000-0002-7941-346X
Kevin A CaillouetSt. Tammany Parish Mosquito Abatement District, St. Tammany Parish, Slidell, Louisiana, United States of America.
Scott R CampbellArthropod-Borne Disease Laboratory, Suffolk County Department of Health Services, Yaphank, New York, United States of America.
Dan DamianVector Control Division, Maricopa County Environmental Services Department, Phoenix, Arizona, United States of America.
Patrick IrwinNorthwest Mosquito Abatement District, Wheeling, Illinois, United States of America.
Herff M P JonesIberia Parish Mosquito Abatement District, Iberia Parish, New Iberia, Louisiana, United States of America.
John TownsendVector Control Division, Maricopa County Environmental Services Department, Phoenix, Arizona, United States of America.
Jeffrey ShamanDepartment of Environmental Health Sciences, Mailman School of Public Health, Columbia University, New York, New York, United States of America.ORCID 0000-0002-7216-7809

Funding

True Metal fac coreP30ES009089 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MATTHEW S PERZANOWSKI · 1998 to 2026
$44.7M
Supplemental Training in Making Data FAIR and AI/ML ReadyT32ES007322 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Pam R Factor-Litvak, Allison Kupsco · 2000 to 2026
$12.1M
Development and Dissemination of Operational Real-Time Respiratory Virus ForecastU01GM110748 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SHAMAN, JEFFREY L · 2014 to 2018
$2.6M
Interdisciplinary Training in Climate and HealthT32ES023770 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SHAMAN, JEFFREY L · 2014 to 2019
$1.5M
Influenza Outbreak Prediction: Applying Data Assimilation Methodology to Make...R01GM100467 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SHAMAN, JEFFREY L · 2011 to 2015
$1.4M
NIEHS NIH HHS P30 ES009089NIEHS NIH HHS T32 ES007322NIEHS NIH HHS T32 ES023770NIGMS NIH HHS R01 GM100467NIGMS NIH HHS U01 GM110748NIH HHS ES009089NIH HHS GM100467NIH HHS T32ES023770
6 · The paper itself

Abstract

Ecological and laboratory studies have demonstrated that temperature modulates West Nile virus (WNV) transmission dynamics and spillover infection to humans. Here we explore whether inclusion of temperature forcing in a model depicting WNV transmission improves WNV forecast accuracy relative to a baseline model depicting WNV transmission without temperature forcing. Both models are optimized using a data assimilation method and two observed data streams: mosquito infection rates and reported human WNV cases. Each coupled model-inference framework is then used to generate retrospective ensemble forecasts of WNV for 110 outbreak years from among 12 geographically diverse United States counties. The temperature-forced model improves forecast accuracy for much of the outbreak season. From the end of July until the beginning of October, a timespan during which 70% of human cases are reported, the temperature-forced model generated forecasts of the total number of human cases over the next 3 weeks, total number of human cases over the season, the week with the highest percentage of infectious mosquitoes, and the peak percentage of infectious mosquitoes that on average increased absolute forecast accuracy 5%, 10%, 12%, and 6%, respectively, over the non-temperature forced baseline model. These results indicate that use of temperature forcing improves WNV forecast accuracy and provide further evidence that temperature influences rates of WNV transmission. The findings provide a foundation for implementation of a statistically rigorous system for real-time forecast of seasonal WNV outbreaks and their use as a quantitative decision support tool for public health officials and mosquito control programs.

Indexed as

AnimalsCulicidaeDisease OutbreaksForecastingHumansInsect VectorsModels, TheoreticalMosquito ControlPublic HealthRetrospective StudiesSeasonsTemperatureWest Nile FeverWest Nile virus

Identifiers

PMID29522514
PMCPMC5862506

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.