Evidence map›Paper›PMID 29521624›Full record

ArticleeLife2018

Functional genomics of lipid metabolism in the oleaginous yeast

Samuel T Coradetti, Dominic Pinel, Gina M Geiselman, Masakazu Ito, Stephen J Mondo, Morgann C Reilly, Ya-Fang Cheng, Stefan Bauer, Igor V Grigoriev, John M Gladden and 4 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 158 citations in OpenAlex.

  1. Article
  2. Article
  3. Barcoded mutant library enables high-throughput functional genomics in a filamentous fungus.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  6. bioRxiv : the preprint server for biology · 2026
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  20. Review

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Samuel T Coradetti *The Buck Institute for Research on Aging, Novato, United States.ORCID http://orcid.org/0000-0003-0173-0403
Dominic Pinel *Energy Biosciences Institute, Berkeley, United States.
Gina M GeiselmanEnergy Biosciences Institute, Berkeley, United States.
Masakazu ItoEnergy Biosciences Institute, Berkeley, United States.
Stephen J MondoUnited States Department of Energy Joint Genome Institute, Walnut Creek, United States.ORCID https://orcid.org/0000-0001-5797-0647
Morgann C ReillyJoint BioEnergy Institute, Emeryville, United States.
Ya-Fang ChengEnergy Biosciences Institute, Berkeley, United States.
Stefan BauerEnergy Biosciences Institute, Berkeley, United States.
Igor V GrigorievUnited States Department of Energy Joint Genome Institute, Walnut Creek, United States.
John M GladdenJoint BioEnergy Institute, Emeryville, United States.ORCID http://orcid.org/0000-0002-6985-2485
Blake A SimmonsJoint BioEnergy Institute, Emeryville, United States.
Rachel B BremThe Buck Institute for Research on Aging, Novato, United States.
Adam P ArkinEnergy Biosciences Institute, Berkeley, United States.ORCID http://orcid.org/0000-0002-4999-2931
Jeffrey M SkerkerEnergy Biosciences Institute, Berkeley, United States.ORCID http://orcid.org/0000-0003-2653-1566
Energy Biosciences Institute · USLawrence Berkeley National Laboratory · USBuck Institute for Research on Aging · USUnited States Department of Energy · USJoint BioEnergy Institute · USPacific Northwest National Laboratory · US

Funding

Genome Sequencer FLXS10RR029668 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI NGAI, JOHN J. · 2010 to 2010
$623k
Pacific Biosciences PacBio RS Single Molecule Real Time SequencerS10OD018174 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI ROKHSAR, DANIEL SOLEYMAN · 2014 to 2014
$600k
Illumina Sequencer to Facilitate Functional Genomics at BerkeleyS10RR027303 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI TAYLOR, JOHN W. · 2010 to 2010
$500k
NCRR NIH HHS S10 RR027303NCRR NIH HHS S10 RR029668NIH HHS S10 OD018174
6 · The paper itself

Abstract

The basidiomycete yeast

Indexed as

GenomicsCarotenoidsGene Expression Regulation, FungalLipid MetabolismLipidsMetabolic EngineeringMutagenesis, InsertionalPhenotypeRhodotorulaSaccharomyces cerevisiaeTransformation, GeneticCarotenoidsLipidscomputational biologyfunctional genomicsinfectious diseaselipid dropletlipid metabolismmicrobiologyoleaginous yeastRhodosporidium toruloidessystems biologyTnSeq

Identifiers

PMID29521624
PMCPMC5922974
OpenAlexW2951505038

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.