Evidence map›Paper›PMID 29521493›Full record

ArticleAnalytical chemistry2018

Dynamic Sparse Sampling for Confocal Raman Microscopy.

Shijie Zhang, Zhengtian Song, G M Dilshan P Godaliyadda, Dong Hye Ye, Azhad U Chowdhury, Atanu Sengupta, Gregery T Buzzard, Charles A Bouman, Garth J Simpson

Erratum issuedAbstract read
In one paragraph

Article in Analytical chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. On-the-fly Raman microscopy guaranteeing the accuracy of discrimination.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. A Review of Pharmaceutical Robot based on Hyperspectral Technology.Journal of intelligent & robotic systems · 2022
    Review
  8. Review
  9. Article
  10. Data mining in Raman imaging in a cellular biological system.Computational and structural biotechnology journal · 2020
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Shijie ZhangDepartment of Chemistry , Purdue University , West Lafayette , Indiana 47907 , United States.
Zhengtian SongDepartment of Chemistry , Purdue University , West Lafayette , Indiana 47907 , United States.
G M Dilshan P GodaliyaddaDepartment of Electrical and Computer Engineering , Purdue University , West Lafayette , Indiana 47097 , United States.
Dong Hye YeDepartment of Electrical and Computer Engineering , Purdue University , West Lafayette , Indiana 47097 , United States.
Azhad U ChowdhuryDepartment of Chemistry , Purdue University , West Lafayette , Indiana 47907 , United States.ORCID 0000-0002-6735-815X
Atanu SenguptaDr. Reddy's Laboratories, IPDO , Bachupally Campus , Hyderabad , Telengana 500090 , India.
Gregery T BuzzardDepartment of Mathematics , Purdue University , West Lafayette , Indiana 47097 , United States.
Charles A BoumanDepartment of Electrical and Computer Engineering , Purdue University , West Lafayette , Indiana 47097 , United States.
Garth J SimpsonDepartment of Chemistry , Purdue University , West Lafayette , Indiana 47907 , United States.ORCID 0000-0002-3932-848X

Funding

Nonlinear Optical Imaging for Guiding Protein Structure DeterminationR01GM103401 · NIGMS · PURDUE UNIVERSITY · PI SIMPSON, GARTH JASON · 2012 to 2018
$1.7M
Ultrafast Nonlinear Optical Approaches toward High-Throughput Membrane Protein NaR01GM103910 · NIGMS · PURDUE UNIVERSITY · PI SIMPSON, GARTH JASON · 2013 to 2016
$1.1M
NIGMS NIH HHS R01 GM103401NIGMS NIH HHS R01 GM103910
6 · The paper itself

Abstract

The total number of data points required for image generation in Raman microscopy was greatly reduced using sparse sampling strategies, in which the preceding set of measurements informed the next most information-rich sampling location. Using this approach, chemical images of pharmaceutical materials were obtained with >99% accuracy from 15.8% sampling, representing an ∼6-fold reduction in measurement time relative to full field of view rastering with comparable image quality. This supervised learning approach to dynamic sampling (SLADS) has the distinct advantage of being directly compatible with standard confocal Raman instrumentation. Furthermore, SLADS is not limited to Raman imaging, potentially providing time-savings in image reconstruction whenever the single-pixel measurement time is the limiting factor in image generation.

Indexed as

Image Processing, Computer-AssistedAlgorithmsMicroscopy, ConfocalSpectrum Analysis, Raman

Identifiers

PMID29521493
PMCPMC6025898

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.