Evidence map›Paper›PMID 29520922›Full record

ArticleProtein science : a publication of the Protein Society2018

Fused dimerization increases expression, solubility, and activity of bacterial dehydratase enzymes.

Carlos Rullán-Lind, Ruth B Pietri, Melvin Vázquez-Cintrón, Abel Baerga-Ortiz

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Engineering of a Peptide α-N-Methyltransferase to Methylate Non-Proteinogenic Amino Acids.Angewandte Chemie (Weinheim an der Bergstrasse, Germany) · 2021
    Article
  5. Strategies for Making Multimeric and Polymeric Bifunctional Protein Conjugates and Their Applications as Bioanalytical Tools.Analytical sciences : the international journal of the Japan Society for Analytical Chemistry · 2021
    Review
  6. A kinetic rationale for functional redundancy in fatty acid biosynthesis.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  7. Recent Progress in the Understanding and Engineering of Coenzyme BFrontiers in bioengineering and biotechnology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Carlos Rullán-LindDepartment of Biochemistry, University of Puerto Rico, Medical Sciences Campus, San Juan, 00936-5067, Puerto Rico.
Ruth B PietriDepartment of Chemistry, University of Puerto Rico, Cayey Campus, Cayey, Puerto Rico.
Melvin Vázquez-CintrónDepartment of Biochemistry, University of Puerto Rico, Medical Sciences Campus, San Juan, 00936-5067, Puerto Rico.
Abel Baerga-OrtizDepartment of Biochemistry, University of Puerto Rico, Medical Sciences Campus, San Juan, 00936-5067, Puerto Rico.
University of Puerto Rico System · PRUniversity of Puerto Rico at Cayey · PRUniversity of Puerto Rico, Medical Sciences Campus · PR

Funding

SCIENCE AND TECHNOLOGY COMPETENCY & EDUCATION CORE (STCE)P20GM103475 · NIGMS · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI Humberto Guillermo Ortiz-Zuazaga · 2012 to 2026
$52.9M
SUPPLEMENT FOR RENOVATION OF ANIMAL FACILITIES AT INSTITUTE OF NEUROBIOLOGYG12RR003051 · NCRR · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI RODRIGUEZ-MEDINA, JOSE R · 1986 to 2011
$28.1M
RISE Option III: MBRS RISE at the UPR Medical Sciences CampusR25GM061838 · NIGMS · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI CADILLA, CARMEN LYDIA · 2000 to 2021
$25.5M
NCRR NIH HHS G12 RR003051NIGMS NIH HHS P20 GM103475NIGMS NIH HHS R25 GM061838
6 · The paper itself

Abstract

FabA and FabZ are the two dehydratase enzymes in Escherichia coli that catalyze the dehydration of acyl intermediates in the biosynthesis of fatty acids. Both enzymes form obligate dimers in which the active site contains key amino acids from both subunits. While FabA is a soluble protein that has been relatively straightforward to express and to purify from cultured E. coli, FabZ has shown to be mostly insoluble and only partially active. In an effort to increase the solubility and activity of both dehydratases, we made constructs consisting of two identical subunits of FabA or FabZ fused with a naturally occurring peptide linker, so as to force their dimerization. The fused dimer of FabZ (FabZ-FabZ) was expressed as a soluble enzyme with an ninefold higher activity in vitro than the unfused FabZ. This construct exemplifies a strategy for the improvement of enzymes from the fatty acid biosynthesis pathways, many of which function as dimers, catalyzing critical steps for the production of fatty acids.

Indexed as

BiocatalysisDehydrationEscherichia coliEscherichia coli ProteinsFatty AcidsFatty Acid Synthase, Type IIHydro-LyasesModels, MolecularProtein MultimerizationSolubility3-hydroxyacyl-(acyl-carrier-protein) dehydrataseEscherichia coli ProteinsFatty AcidsFatty Acid Synthase, Type IIHydro-Lyasesenzyme engineeringFabAFabZfatty acidsfused dimerizationpeptide linkers

Identifiers

PMID29520922
PMCPMC5916124
OpenAlexW2789432453

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.