Evidence map›Paper›PMID 29520450›Full record

ArticleMicrobial ecology2018

Haloarchaea from the Andean Puna: Biological Role in the Energy Metabolism of Arsenic.

Omar Federico Ordoñez, María Cecilia Rasuk, Mariana Noelia Soria, Manuel Contreras, María Eugenia Farías

Open access · bronzeAbstract read
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In one paragraph

Article in Microbial ecology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Polystyrene Degradation byMicroorganisms · 2022
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. DMSO Reductase Family: Phylogenetics and Applications of Extremophiles.International journal of molecular sciences · 2019
    Review
  17. Complete arsenic-based respiratory cycle in the marine microbial communities of pelagic oxygen-deficient zones.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  18. Diversity and Niche of Archaea in Bioremediation.Archaea (Vancouver, B.C.) · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Omar Federico OrdoñezLaboratorio de Investigaciones Microbiológicas de Lagunas Andinas (LIMLA), Planta Piloto de Procesos Industriales y Microbiológicos (PROIMI), CCT, CONICET, Av. Belgrano y Pasaje Caseros, 4000, Tucumán, Argentina.
María Cecilia RasukLaboratorio de Investigaciones Microbiológicas de Lagunas Andinas (LIMLA), Planta Piloto de Procesos Industriales y Microbiológicos (PROIMI), CCT, CONICET, Av. Belgrano y Pasaje Caseros, 4000, Tucumán, Argentina.
Mariana Noelia SoriaLaboratorio de Investigaciones Microbiológicas de Lagunas Andinas (LIMLA), Planta Piloto de Procesos Industriales y Microbiológicos (PROIMI), CCT, CONICET, Av. Belgrano y Pasaje Caseros, 4000, Tucumán, Argentina.
Manuel ContrerasCentro de Ecología Aplicada (CEA), Suecia 3304, 56-2-2741872, Ñuñoa, Santiago, Chile.
María Eugenia FaríasLaboratorio de Investigaciones Microbiológicas de Lagunas Andinas (LIMLA), Planta Piloto de Procesos Industriales y Microbiológicos (PROIMI), CCT, CONICET, Av. Belgrano y Pasaje Caseros, 4000, Tucumán, Argentina. mefarias2009@gmail.com.ORCID http://orcid.org/0000-0002-2771-8915
Consejo Nacional de Investigaciones Científicas y Técnicas · AR

Funding

Fondo para la Investigación Científica y Tecnológica PICT 730Fondo para la Investigación Científica y Tecnológica PICT V 3825
6 · The paper itself

Abstract

Biofilms, microbial mats, and microbialites dwell under highly limiting conditions (high salinity, extreme aridity, pH, and elevated arsenic concentration) in the Andean Puna. Only recent pioneering studies have described the microbial diversity of different Altiplano lakes and revealed their unexpectedly diverse microbial communities. Arsenic metabolism is proposed to be an ancient mechanism to obtain energy by microorganisms. Members of Bacteria and Archaea are able to exploit arsenic as a bioenergetic substrate in either anaerobic arsenate respiration or chemolithotrophic growth on arsenite. Only six aioAB sequences coding for arsenite oxidase and three arrA sequences coding for arsenate reductase from haloarchaea were previously deposited in the NCBI database. However, no experimental data on their expression and function has been reported. Recently, our working group revealed the prevalence of haloarchaea in a red biofilm from Diamante Lake and microbial mat from Tebenquiche Lake using a metagenomics approach. Also, a surprisingly high abundance of genes used for anaerobic arsenate respiration (arr) and arsenite oxidation (aio) was detected in the Diamante's metagenome. In order to study in depth the role of arsenic in these haloarchaeal communities, in this work, we obtained 18 haloarchaea belonging to the Halorubrum genus, tolerant to arsenic. Furthermore, the identification and expression analysis of genes involved in obtaining energy from arsenic compounds (aio and arr) showed that aio and arr partial genes were detected in 11 isolates, and their expression was verified in two selected strains. Better growth of two isolates was obtained in presence of arsenic compared to control. Moreover, one of the isolates was able to oxidize As[III]. The confirmation of the oxidation of arsenic and the transcriptional expression of these genes by RT-PCR strongly support the hypothesis that the arsenic can be used in bioenergetics processes by the microorganisms flourishing in these environments.

Indexed as

ArchaeaArchaeal ProteinsArsenate ReductasesArsenatesArsenicBiofilmsChemoautotrophic GrowthEnergy MetabolismLakesPhylogenySouth AmericaArchaeal ProteinsArsenate ReductasesArsenatesArsenicarsenic acidAndean PunaArsenicBioenergetic purposesChemolitotrophic growthHaloarchaea

Identifiers

PMID29520450
OpenAlexW2794220514

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.