Evidence map›Paper›PMID 29520297›Full record

ArticleFrontiers in genetics2018

Genomic Characterisation of the Indigenous Irish Kerry Cattle Breed.

Sam Browett, Gillian McHugo, Ian W Richardson, David A Magee, Stephen D E Park, Alan G Fahey, John F Kearney, Carolina N Correia, Imtiaz A S Randhawa, David E MacHugh

Abstract read
In one paragraph

Article in Frontiers in genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  14. Genomic relatedness and diversity of Swedish native cattle breeds.Genetics, selection, evolution : GSE · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Sam BrowettEcosystems and Environment Research Centre, School of Environment and Life Sciences, University of Salford, Salford, United Kingdom.
Gillian McHugoAnimal Genomics Laboratory, UCD School of Agriculture and Food Science, University College Dublin, Dublin, Ireland.
Ian W RichardsonIdentiGEN Ltd., Dublin, Ireland.
David A MageeAnimal Genomics Laboratory, UCD School of Agriculture and Food Science, University College Dublin, Dublin, Ireland.
Stephen D E ParkIdentiGEN Ltd., Dublin, Ireland.
Alan G FaheyAnimal Genomics Laboratory, UCD School of Agriculture and Food Science, University College Dublin, Dublin, Ireland.
John F KearneyIrish Cattle Breeding Federation, Bandon, Ireland.
Carolina N CorreiaAnimal Genomics Laboratory, UCD School of Agriculture and Food Science, University College Dublin, Dublin, Ireland.
Imtiaz A S RandhawaSydney School of Veterinary Science, The University of Sydney, Camden, NSW, Australia.
David E MacHughAnimal Genomics Laboratory, UCD School of Agriculture and Food Science, University College Dublin, Dublin, Ireland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Kerry cattle are an endangered landrace heritage breed of cultural importance to Ireland. In the present study we have used genome-wide SNP array data to evaluate genomic diversity within the Kerry population and between Kerry cattle and other European breeds. Patterns of genetic differentiation and gene flow among breeds using phylogenetic trees with ancestry graphs highlighted historical gene flow from the British Shorthorn breed into the ancestral population of modern Kerry cattle. Principal component analysis (PCA) and genetic clustering emphasised the genetic distinctiveness of Kerry cattle relative to comparator British and European cattle breeds. Modelling of genetic effective population size (

Indexed as

cattleconservation genomicsendangered breedgenetic diversityinbreedingpopulation genomicsselection signaturesingle nucleotide polymorphism

Identifiers

PMID29520297
PMCPMC5827531

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.