Evidence map›Paper›PMID 29520055›Full record

ArticleScientific reports2018

Global transcriptomic analysis suggests carbon dioxide as an environmental stressor in spaceflight: A systems biology GeneLab case study.

Afshin Beheshti, Egle Cekanaviciute, David J Smith, Sylvain V Costes

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 55 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Risks and benefits of face masks in children.Frontiers in pediatrics · 2026
    Review
  7. Review
  8. Review
  9. The human biology of spaceflight.American journal of human biology : the official journal of the Human Biology Council · 2024
    Article
  10. Review
  11. Carbon Dioxide (CONutrients · 2023
    Article
  12. iScience · 2023
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Afshin BeheshtiWyle Labs, Space Biosciences Division, NASA Ames Research Center, Mountain View, CA, USA. afshin.beheshti@nasa.gov.
Egle CekanaviciuteUniversities Space Research Association, Space Biosciences Division, NASA Ames Research Center, Mountain View, CA, USA.ORCID 0000-0003-3306-1806
David J SmithNASA, Space Biosciences Division, NASA Ames Research Center, Mountain View, CA, USA.
Sylvain V CostesNASA, Space Biosciences Division, NASA Ames Research Center, Mountain View, CA, USA. sylvain.v.costes@nasa.gov.ORCID 0000-0002-8542-2389
Ames Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spaceflight introduces a combination of environmental stressors, including microgravity, ionizing radiation, changes in diet and altered atmospheric gas composition. In order to understand the impact of each environmental component on astronauts it is important to investigate potential influences in isolation. Rodent spaceflight experiments involve both standard vivarium cages and animal enclosure modules (AEMs), which are cages used to house rodents in spaceflight. Ground control AEMs are engineered to match the spaceflight environment. There are limited studies examining the biological response invariably due to the configuration of AEM and vivarium housing. To investigate the innate global transcriptomic patterns of rodents housed in spaceflight-matched AEM compared to standard vivarium cages we utilized publicly available data from the NASA GeneLab repository. Using a systems biology approach, we observed that AEM housing was associated with significant transcriptomic differences, including reduced metabolism, altered immune responses, and activation of possible tumorigenic pathways. Although we did not perform any functional studies, our findings revealed a mild hypoxic phenotype in AEM, possibly due to atmospheric carbon dioxide that was increased to match conditions in spaceflight. Our investigation illustrates the process of generating new hypotheses and informing future experimental research by repurposing multiple space-flown datasets.

Indexed as

Gene Expression ProfilingSpace FlightStress, PhysiologicalSystems BiologyTranscriptomeAnimalsCarbon DioxideFemaleMaleMiceRadiation, IonizingRatsWeightlessnessCarbon Dioxide

Identifiers

PMID29520055
PMCPMC5843582
OpenAlexW2806335872

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.