Evidence map›Paper›PMID 29520003›Full record

ArticleNature communications2018

Phosphorylation of conserved phosphoinositide binding pocket regulates sorting nexin membrane targeting.

Marc Lenoir, Cansel Ustunel, Sandya Rajesh, Jaswant Kaur, Dimitri Moreau, Jean Gruenberg, Michael Overduin

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 50 citations in OpenAlex.

  1. SNX-3 confers lysosomal fusion-competence to sustain basal autophagy.Cellular and molecular life sciences : CMLS · 2026
    Article
  2. Article
  3. Article
  4. Deciphering the language of mingling lipids and proteins.Current opinion in structural biology · 2025
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Receptor Recycling by Retromer.Molecular and cellular biology · 2023
    Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Phosphoinositide Recognition Sites Are Blocked by Metabolite Attachment.Frontiers in cell and developmental biology · 2021
    Article
  18. Article
  19. Development (Cambridge, England) · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Marc LenoirSchool of Cancer Sciences, College of Medical and Dental Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
Cansel UstunelBiochemistry Department, University of Geneva, 30 quai Ernest Ansermet, 1211, Geneva 4, Switzerland.
Sandya RajeshSchool of Cancer Sciences, College of Medical and Dental Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
Jaswant KaurSchool of Cancer Sciences, College of Medical and Dental Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
Dimitri MoreauBiochemistry Department, University of Geneva, 30 quai Ernest Ansermet, 1211, Geneva 4, Switzerland.ORCID http://orcid.org/0000-0002-9282-3324
Jean GruenbergBiochemistry Department, University of Geneva, 30 quai Ernest Ansermet, 1211, Geneva 4, Switzerland.ORCID http://orcid.org/0000-0002-0300-4862
Michael OverduinDepartment of Biochemistry, Faculty of Medicine & Dentistry, University of Alberta, Medical Sciences Building, Edmonton, AB, T6G 2H7, Canada. overduin@ualberta.ca.ORCID http://orcid.org/0000-0002-3114-6585
University of Birmingham · GBUniversity of Geneva · CHUniversity of Alberta · CA

Funding

Biotechnology and Biological Sciences Research Council BB/H019383/1Biotechnology and Biological Sciences Research Council BB/H024697/1Biotechnology and Biological Sciences Research Council BBS/B/10714
6 · The paper itself

Abstract

Sorting nexins anchor trafficking machines to membranes by binding phospholipids. The paradigm of the superfamily is sorting nexin 3 (SNX3), which localizes to early endosomes by recognizing phosphatidylinositol 3-phosphate (PI3P) to initiate retromer-mediated segregation of cargoes to the trans-Golgi network (TGN). Here we report the solution structure of full length human SNX3, and show that PI3P recognition is accompanied by bilayer insertion of a proximal loop in its extended Phox homology (PX) domain. Phosphoinositide (PIP) binding is completely blocked by cancer-linked phosphorylation of a conserved serine beside the stereospecific PI3P pocket. This "PIP-stop" releases endosomal SNX3 to the cytosol, and reveals how protein kinases control membrane assemblies. It constitutes a widespread regulatory element found across the PX superfamily and throughout evolution including of fungi and plants. This illuminates the mechanism of a biological switch whereby structured PIP sites are phosphorylated to liberate protein machines from organelle surfaces.

Indexed as

Amino Acid SequenceCell MembraneHumansMolecular Sequence DataPhosphatidylinositol PhosphatesPhosphatidylinositolsPhospholipidsPhosphorylationProtein BindingProtein TransportSorting Nexinstrans-Golgi Networkphosphatidylinositol 3-phosphatePhosphatidylinositol PhosphatesPhosphatidylinositolsPhospholipidsSNX3 protein, humanSorting Nexins

Identifiers

PMID29520003
PMCPMC5843628
OpenAlexW2792644014

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.