Evidence map›Paper›PMID 29519897›Full record

ArticleEMBO reports2018

MARCH6 and TRC8 facilitate the quality control of cytosolic and tail-anchored proteins.

Sandra Stefanovic-Barrett, Anna S Dickson, Stephen P Burr, James C Williamson, Ian T Lobb, Dick Jh van den Boomen, Paul J Lehner, James A Nathan

Open access · hybridAbstract read
In one paragraph

Article in EMBO reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
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  16. The Endoplasmic Reticulum and the Fidelity of Nascent Protein Localization.Cold Spring Harbor perspectives in biology · 2023
    Review
  17. Frontiers in molecular biosciences · 2023
    Article
  18. Endoplasmic Reticulum-Associated Protein Degradation.Cold Spring Harbor perspectives in biology · 2022
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Sandra Stefanovic-BarrettDepartment of Medicine, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.
Anna S DicksonDepartment of Medicine, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.
Stephen P BurrDepartment of Medicine, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.
James C WilliamsonDepartment of Medicine, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.
Ian T LobbDepartment of Medicine, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.
Dick Jh van den BoomenDepartment of Medicine, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.
Paul J LehnerDepartment of Medicine, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK.
James A NathanDepartment of Medicine, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK jan33@cam.ac.uk.ORCID 0000-0002-0248-1632
University of Cambridge · GB

Funding

Medical Research CouncilWellcome Trust 084957/Z/08/ZWellcome Trust 100140Wellcome Trust 102770/Z/13/ZWellcome Trust 210688/Z/18/Z
6 · The paper itself

Abstract

Misfolded or damaged proteins are typically targeted for destruction by proteasome-mediated degradation, but the mammalian ubiquitin machinery involved is incompletely understood. Here, using forward genetic screens in human cells, we find that the proteasome-mediated degradation of the soluble misfolded reporter, mCherry-CL1, involves two ER-resident E3 ligases, MARCH6 and TRC8. mCherry-CL1 degradation is routed via the ER membrane and dependent on the hydrophobicity of the substrate, with complete stabilisation only observed in double knockout MARCH6/TRC8 cells. To identify a more physiological correlate, we used quantitative mass spectrometry and found that TRC8 and MARCH6 depletion altered the turnover of the tail-anchored protein heme oxygenase-1 (HO-1). These E3 ligases associate with the intramembrane cleaving signal peptide peptidase (SPP) and facilitate the degradation of HO-1 following intramembrane proteolysis. Our results highlight how ER-resident ligases may target the same substrates, but work independently of each other, to optimise the protein quality control of selected soluble and tail-anchored proteins.

Indexed as

UbiquitinationEndoplasmic ReticulumGene Knockout TechniquesHeLa CellsHeme Oxygenase-1HumansMass SpectrometryMembrane ProteinsProteolysisReceptors, Cell SurfaceUbiquitin-Protein LigasesHeme Oxygenase-1HMOX1 protein, humanMARCHF6 protein, humanMembrane ProteinsReceptors, Cell SurfaceRNF139 protein, humanUbiquitin-Protein LigasesERADintramembrane proteolysisMARCH6protein quality controlTRC8

Identifiers

PMID29519897
PMCPMC5934766
OpenAlexW2794441819

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.