Evidence map›Paper›PMID 29518185›Full record

Trial reportClinical infectious diseases : an official publication of the Infectious Diseases Society of America2018

Gut Microbiome Composition Predicts Infection Risk During Chemotherapy in Children With Acute Lymphoblastic Leukemia.

Hana Hakim, Ronald Dallas, Joshua Wolf, Li Tang, Stacey Schultz-Cherry, Victoria Darling, Cydney Johnson, Erik A Karlsson, Ti-Cheng Chang, Sima Jeha and 6 more

3 registry-linked trialsOpen access · bronzeAbstract readClinical Trial
In one paragraph

Trial report in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 3 registered trials, which are not on this map. Cited by 122 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
122citing papers in PubMed, 1 pooled it
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00137111 phase3completednot on this map

Total XV - Total Therapy Study XV for Newly Diagnosed Patients With Acute Lymphoblastic Leukemia

TypeinterventionalSponsorSt. Jude Children's Research HospitalRan2000 to 2014Enrolled501ConditionsLymphoblastic Leukemia, AcuteArmsPrednisone, Dexamethasone, Vincristine, Daunorubicin, Doxorubicin, L-asparaginase, PEG-L-asparaginase, Erwinia asparaginase, Methotrexate, Cyclophosphamide, Cytarabine, Etoposide, Mercaptopurine, Imatinib, chemotherapy, intrathecal chemotherapy
NCT00549848 phase3completednot on this map

Total Therapy Study XVI for Newly Diagnosed Patients With Acute Lymphoblastic Leukemia

TypeinterventionalSponsorSt. Jude Children's Research HospitalRan2007 to 2022Enrolled600ConditionsAcute Lymphoblastic LeukemiaArmsPrednisone, Vincristine, Daunorubicin, PEG-L-asparaginase, Erwinia L-asparaginase, Doxorubicin, Cyclophosphamide, Cytarabine, Thioguanine, Clofarabine, Methotrexate, Mercaptopurine, Dexamethasone, Etoposide, Dasatinib
NCT06560879 phase2enrolling by invitationnot on this mapstarted 2025, after this paper: background citation

Effectiveness of Probiotics for the Prevention of Gastrointestinal Toxicity and Changes in Gut Microbiota in Children With Acute Lymphoblastic Leukemia

TypeinterventionalSponsorNational Institute of Pediatrics, MexicoRan2025 to 2026Enrolled120ConditionsProbiotics, Gastrointestinal Diseases, Precursor Cell Lymphoblastic Leukemia-LymphomaArmsLactobacillus casei, Lactobacillus rhamnosus, Bifidobacterium bifidum, Placebo
3 · Its place in the literature

Who cites it

122 citing papers in PubMed, 1 synthesis or guideline pooled it, 182 citations in OpenAlex.

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  19. Nutrition Support Interventions for Children and Young People Treated for Osteosarcoma: A Scoping Review.Journal of human nutrition and dietetics : the official journal of the British Dietetic Association · 2025
    Article
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62 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 1 institution in 1 country.

Hana HakimDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee.
Ronald DallasDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee.
Joshua WolfDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee.
Li TangDepartment of Biostatistics, St Jude Children's Research Hospital, Memphis, Tennessee.
Stacey Schultz-CherryDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee.
Victoria DarlingDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee.
Cydney JohnsonDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee.
Erik A KarlssonDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee.
Ti-Cheng ChangDepartment of Computational Biology, St Jude Children's Research Hospital, Memphis, Tennessee.
Sima JehaDepartment of Oncology, St Jude Children's Research Hospital, Memphis, Tennessee.
Ching-Hon PuiDepartment of Oncology, St Jude Children's Research Hospital, Memphis, Tennessee.
Yilun SunDepartment of Biostatistics, St Jude Children's Research Hospital, Memphis, Tennessee.
Stanley PoundsDepartment of Biostatistics, St Jude Children's Research Hospital, Memphis, Tennessee.
Randall T HaydenDepartment of Pathology, St Jude Children's Research Hospital, Memphis, Tennessee.
Elaine TuomanenDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee.
Jason W RoschDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, Tennessee.
St. Jude Children's Research Hospital · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
NCI NIH HHS P30 CA021765
6 · The paper itself

Abstract

Background: Myelosuppression-related infections remain important causes of morbidity and mortality in children with acute lymphoblastic leukemia (ALL). Methods: By analyzing fecal samples collected at diagnosis and after each of the initial 3 phases of chemotherapy, we evaluated the role of gut microbiota in predicting infections in 199 children with newly diagnosed ALL. The bacterial 16S rRNA gene was analyzed by high-depth sequencing to determine the diversity and composition of the microbiome. Results: After the induction and reinduction I phases of chemotherapy, microbial diversity decreased significantly relative to the prechemotherapy value. After chemotherapy, the relative abundance of certain bacterial taxa (eg, Bacteroidetes) decreased significantly, whereas that of other taxa (eg, Clostridiaceae and Streptococcaceae) increased. A baseline gut microbiome characterized by Proteobacteria predicted febrile neutropenia. Adjusting for the chemotherapy phase and ALL risk level, Enterococcaceae dominance (relative abundance ≥30%) predicted significantly greater risk of subsequent febrile neutropenia and diarrheal illness, whereas Streptococcaceae dominance predicted significantly greater risk of subsequent diarrheal illness. Conclusions: In children undergoing therapy for newly diagnosed ALL, the relative abundance of Proteobacteria before chemotherapy initiation predicts development of febrile neutropenia, and domination of the gut microbiota by Enterococcaceae or Streptococcaceae at any time during chemotherapy predicts infection in subsequent phases of chemotherapy. Clinical Trial Registration: NCT00549848.

Indexed as

AdolescentAntineoplastic AgentsBacteriaBacterial InfectionsChildChild, PreschoolFecesFemaleGastrointestinal MicrobiomeHigh-Throughput Nucleotide SequencingHumansInfantMalePrecursor Cell Lymphoblastic Leukemia-LymphomaPredictive Value of TestsRisk FactorsAntineoplastic AgentsRNA, Ribosomal, 16S

Identifiers

PMID29518185
PMCPMC6070042
OpenAlexW2790971321

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.