Evidence map›Paper›PMID 29515789›Full record

ArticleOncotarget2018

Mutational landscape of radiation-associated angiosarcoma of the breast.

Bryan J Thibodeau, Vincent Lavergne, Nayana Dekhne, Pamela Benitez, Mitual Amin, Samreen Ahmed, Jean L Nakamura, Philip R Davidson, Alice O Nakamura, Inga S Grills and 3 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

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  17. A Case Report of Post-RadiotherapyCase reports in oncology
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Bryan J ThibodeauBeaumont BioBank, Beaumont Health, Royal Oak, MI, USA.
Vincent LavergneDepartment of Radiation Oncology, University of California, San Francisco, CA, USA.
Nayana DekhneDepartment of Surgery, Beaumont Health, Royal Oak, MI, USA.
Pamela BenitezDepartment of Surgery, Beaumont Health, Royal Oak, MI, USA.
Mitual AminDepartment of Pathology, Beaumont Health, Royal Oak, MI, USA.
Samreen AhmedBeaumont BioBank, Beaumont Health, Royal Oak, MI, USA.
Jean L NakamuraDepartment of Radiation Oncology, University of California, San Francisco, CA, USA.
Philip R DavidsonDepartment of Finance and Statistical Analysis, University of Alberta, Edmonton, Alberta, Canada.
Alice O NakamuraDepartment of Finance and Statistical Analysis, University of Alberta, Edmonton, Alberta, Canada.
Inga S GrillsDepartment of Radiation Oncology, Beaumont Health, Royal Oak, MI, USA.
Peter Y ChenDepartment of Radiation Oncology, Beaumont Health, Royal Oak, MI, USA.
Jessica WobbDepartment of Radiation Oncology, Beaumont Health, Royal Oak, MI, USA.
George D WilsonBeaumont BioBank, Beaumont Health, Royal Oak, MI, USA.
Beaumont Health · USUniversity of Alberta · CAUniversity of California, San Francisco · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeRadiation-associated breast angiosarcomas are a rare complication of radiation therapy for breast carcinoma. With relatively little is known about the genetic abnormalities present in these secondary tumors, we examined genomic variation in biospecimens from radiation-associated breast angiosarcomas. EXPERIMENTAL

designPatients were identified that had a previous breast cancer diagnosis, received radiation therapy, and developed angiosarcoma in the ipsilateral breast as the earlier cancer. Tumor regions were isolated from archival blocks using subsequent laser capture microdissection. Next generation sequencing was performed using a targeted panel of 160 cancer-related genes. Genomic variants were identified for mutation and trinucleotide-based mutational signature analysis.

results44 variants in 34 genes were found in more than two thirds of the cases; this included 12 variants identified as potentially deleterious. Of particular note, the BRCA1 DNA damage response pathway was highly enriched with genetic variation. In a comparison to local recurrences, 14 variants in 11 genes were present in both the primary and recurrent lesions including variants in genes associated with the DNA damage response machinery. Furthermore, the mutational signature analysis shows that a previously defined IR signature is present in almost all of the current samples characterized by predominantly C→T substitutions.

conclusionsWhile radiation-associated breast angiosarcomas are relatively uncommon, their prognosis is very poor. These data demonstrate a mutational pattern associated with genes involved in DNA repair. While important in revealing the biology behind these tumors, it may also suggest new treatment strategies that will prove successful.

Indexed as

angiosarcomabreastmutational signaturenext generation sequencingradiation-associated

Identifiers

PMID29515789
PMCPMC5839370
OpenAlexW2790875798

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.