Evidence map›Paper›PMID 29515178›Full record

ArticleScientific reports2018

Brettanomyces bruxellensis population survey reveals a diploid-triploid complex structured according to substrate of isolation and geographical distribution.

Marta Avramova, Alice Cibrario, Emilien Peltier, Monika Coton, Emmanuel Coton, Joseph Schacherer, Giuseppe Spano, Vittorio Capozzi, Giuseppe Blaiotta, Franck Salin and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
15.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 103 citations in OpenAlex.

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  12. A new cheese population inEvolutionary applications · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 4 countries.

Marta AvramovaUniv. Bordeaux, ISVV, Unité de recherche Œnologie EA 4577, USC 1366 INRA, Bordeaux, INP, 33140 Villenave d'Ornon, France. avramova.marta@gmail.com.
Alice CibrarioUniv. Bordeaux, ISVV, Unité de recherche Œnologie EA 4577, USC 1366 INRA, Bordeaux, INP, 33140 Villenave d'Ornon, France.
Emilien PeltierUniv. Bordeaux, ISVV, Unité de recherche Œnologie EA 4577, USC 1366 INRA, Bordeaux, INP, 33140 Villenave d'Ornon, France.
Monika CotonUniversité de Brest, EA 3882, Laboratoire Universitaire de Biodiversité et Ecologie Microbienne, ESIAB, Technopôle Brest-Iroise, 29280, Plouzané, France.
Emmanuel CotonUniversité de Brest, EA 3882, Laboratoire Universitaire de Biodiversité et Ecologie Microbienne, ESIAB, Technopôle Brest-Iroise, 29280, Plouzané, France.
Joseph SchachererUniversité de Strasbourg, Centre National de la Recherche Scientifique, Génétique Moléculaire, Génomique, Microbiologie, Unité Mixte de Recherche, 7156, Strasbourg, France.
Giuseppe SpanoDepartment of the Science of Agriculture, Food and Environment, University of Foggia, Foggia, Italy.
Vittorio CapozziDepartment of the Science of Agriculture, Food and Environment, University of Foggia, Foggia, Italy.
Giuseppe BlaiottaDepartment of Agricultural Sciences, Division of Vine and Wine Sciences, University of Naples Federico II, Viale Italia, 83100, Avellino, Italy.
Franck SalinINRA, UMR Biodiversité Gènes et Ecosystèmes, PlateForme Génomique, 33610, Cestas, France.
Marguerite Dols-LafargueUniv. Bordeaux, ISVV, Unité de recherche Œnologie EA 4577, USC 1366 INRA, Bordeaux, INP, 33140 Villenave d'Ornon, France.
Paul GrbinSchool of Agriculture, Food and Wine, The University of Adelaide, PMB 1, Glen Osmond, SA 5064, Australia.ORCID 0000-0002-7997-6131
Chris CurtinDepartment of Food Science and Technology, Oregon State University, 100 Wiegand Hall, Corvallis, Oregon, 97331-6602, USA.
Warren AlbertinUniv. Bordeaux, ISVV, Unité de recherche Œnologie EA 4577, USC 1366 INRA, Bordeaux, INP, 33140 Villenave d'Ornon, France.
Isabelle Masneuf-PomaredeUniv. Bordeaux, ISVV, Unité de recherche Œnologie EA 4577, USC 1366 INRA, Bordeaux, INP, 33140 Villenave d'Ornon, France.
Université de Bordeaux · FRUniversité de Bretagne Occidentale · FRUniversity of Foggia · ITCEA CESTA · FRGénétique Moléculaire Génomique Microbiologie · FROregon State University · USThe University of Adelaide · AUUniversity of Naples Federico II · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brettanomyces bruxellensis is a unicellular fungus of increasing industrial and scientific interest over the past 15 years. Previous studies revealed high genotypic diversity amongst B. bruxellensis strains as well as strain-dependent phenotypic characteristics. Genomic assemblies revealed that some strains harbour triploid genomes and based upon prior genotyping it was inferred that a triploid population was widely dispersed across Australian wine regions. We performed an intraspecific diversity genotypic survey of 1488 B. bruxellensis isolates from 29 countries, 5 continents and 9 different fermentation niches. Using microsatellite analysis in combination with different statistical approaches, we demonstrate that the studied population is structured according to ploidy level, substrate of isolation and geographical origin of the strains, underlying the relative importance of each factor. We found that geographical origin has a different contribution to the population structure according to the substrate of origin, suggesting an anthropic influence on the spatial biodiversity of this microorganism of industrial interest. The observed clustering was correlated to variable stress response, as strains from different groups displayed variation in tolerance to the wine preservative sulfur dioxide (SO

Indexed as

BrettanomycesDiploidyGenome, FungalGenotypeTriploidyAustraliaWine

Identifiers

PMID29515178
PMCPMC5841430
OpenAlexW2794281076

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.