Evidence map›Paper›PMID 29514982›Full record

ArticleThe Journal of biological chemistry2018

Structural mechanism of DNA interstrand cross-link unhooking by the bacterial FAN1 nuclease.

Hyeonseok Jin, Upasana Roy, Gwangrog Lee, Orlando D Schärer, Yunje Cho

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Genes · 2024
    Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Hyeonseok JinFrom the Department of Life Science, Pohang University of Science and Technology, Pohang, Kyungbook 37673, South Korea.
Upasana Roythe Departments of Chemistry and Pharmacological Sciences, Stony Brook University, Stony Brook, New York 11794.
Gwangrog Leethe Department of Biology, Gwangju Institute of Science and Technology, Gwangju 61005, South Korea.
Orlando D Schärerthe Departments of Chemistry and Pharmacological Sciences, Stony Brook University, Stony Brook, New York 11794.
Yunje ChoFrom the Department of Life Science, Pohang University of Science and Technology, Pohang, Kyungbook 37673, South Korea, yunje@postech.ac.kr.
Pohang University of Science and Technology · KRGwangju Institute of Science and Technology · KRInstitute for Basic Science · KRStony Brook University · US

Funding

Synthesis, Structure and Repair of DNA Interstrand CrosslinksR01CA165911 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI SCHARER, ORLANDO D. · 2012 to 2016
$1.6M
NCI NIH HHS R01 CA165911
6 · The paper itself

Abstract

DNA interstrand cross-links (ICLs) block the progress of the replication and transcription machineries and can weaken chromosomal stability, resulting in various diseases. FANCD2-FANCI-associated nuclease (FAN1) is a conserved structure-specific nuclease that unhooks DNA ICLs independently of the Fanconi anemia pathway. Recent structural studies have proposed two different mechanistic features for ICL unhooking by human FAN1: a specific basic pocket that recognizes the terminal phosphate of a 1-nucleotide (nt) 5' flap or FAN1 dimerization. Herein, we show that despite lacking these features,

Indexed as

Molecular Dynamics SimulationBacterial ProteinsDeoxyribonuclease IProtein DomainsPseudomonas aeruginosaStructure-Activity RelationshipBacterial ProteinsDeoxyribonuclease Ibacterial FAN1basic pocketDNA endonucleaseDNA interstrand cross-linkDNA repairenzyme mechanismFANCD2–FANCI-associated nucleaseICL unhookingmolecular biologyprotein–nucleic acid interactionprotein structure

Identifiers

PMID29514982
PMCPMC5925792
OpenAlexW2789269116

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.