Evidence map›Paper›PMID 29514250›Full record

ArticleNucleic acids research2018

Pseudomonas aeruginosa MutL promotes large chromosomal deletions through non-homologous end joining to prevent bacteriophage predation.

Mengyu Shen, Huidong Zhang, Wei Shen, Zhenyu Zou, Shuguang Lu, Gang Li, Xuesong He, Melissa Agnello, Wenyuan Shi, Fuquan Hu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
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  10. Complementary killing activities ofAntimicrobial agents and chemotherapy · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Mengyu ShenDepartment of Microbiology, Third Military Medical University, Chongqing 400038, China.
Huidong ZhangInstitute of Toxicology, College of Preventive Medicine, Third Military Medical University, Chongqing 400038, China.
Wei ShenDepartment of Medical Laboratory, Chengdu Military General Hospital, Chengdu 610083, China.
Zhenyu ZouInstitute of Toxicology, College of Preventive Medicine, Third Military Medical University, Chongqing 400038, China.
Shuguang LuDepartment of Microbiology, Third Military Medical University, Chongqing 400038, China.
Gang LiDepartment of Microbiology, Third Military Medical University, Chongqing 400038, China.
Xuesong HeThe Forsyth Institute, 245 First St, Cambridge, MA 02142, USA.
Melissa AgnelloSchool of Dentistry, University of California, Los Angeles, CA 90095, USA.
Wenyuan ShiThe Forsyth Institute, 245 First St, Cambridge, MA 02142, USA.
Fuquan HuDepartment of Microbiology, Third Military Medical University, Chongqing 400038, China.
Shuai LeDepartment of Microbiology, Third Military Medical University, Chongqing 400038, China.
Army Medical University · CNChengdu Military General Hospital · CNUniversity of California, Los Angeles · US

Funding

Domestication and characterization of TM7-the most elusive oral phylumR01DE023810 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Xuesong He, Jeffrey Scott McLean · 2014 to 2026
$6.6M
Studying the Protective Effects of Normal Oral FloraR01DE026186 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI HE, XUESONG, MCLEAN, JEFFREY SCOTT · 2016 to 2020
$2.1M
NIDCR NIH HHS R01 DE023810NIDCR NIH HHS R01 DE026186
6 · The paper itself

Abstract

Pseudomonas aeruginosa is an opportunistic pathogen with a relatively large genome, and has been shown to routinely lose genomic fragments during environmental selection. However, the underlying molecular mechanisms that promote chromosomal deletion are still poorly understood. In a recent study, we showed that by deleting a large chromosomal fragment containing two closely situated genes, hmgA and galU, P. aeruginosa was able to form 'brown mutants', bacteriophage (phage) resistant mutants with a brown color phenotype. In this study, we show that the brown mutants occur at a frequency of 227 ± 87 × 10-8 and contain a deletion ranging from ∼200 to ∼620 kb. By screening P. aeruginosa transposon mutants, we identified mutL gene whose mutation constrained the emergence of phage-resistant brown mutants. Moreover, the P. aeruginosa MutL (PaMutL) nicking activity can result in DNA double strand break (DSB), which is then repaired by non-homologous end joining (NHEJ), leading to chromosomal deletions. Thus, we reported a noncanonical function of PaMutL that promotes chromosomal deletions through NHEJ to prevent phage predation.

Indexed as

BacteriophagesChromosome DeletionDNA End-Joining RepairBacterial ProteinsDNA Breaks, Double-StrandedMutL ProteinsPseudomonas aeruginosaRecombinational DNA RepairBacterial ProteinsMutL Proteins

Identifiers

PMID29514250
PMCPMC5961081
OpenAlexW2789876988

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.