Evidence map›Paper›PMID 29513652›Full record

ArticleNature2018

EWS-FLI1 increases transcription to cause R-loops and block BRCA1 repair in Ewing sarcoma.

Aparna Gorthi, July Carolina Romero, Eva Loranc, Lin Cao, Liesl A Lawrence, Elicia Goodale, Amanda Balboni Iniguez, Xavier Bernard, V Pragathi Masamsetti, Sydney Roston and 6 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Nature, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 211 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
211citing papers in PubMed, 1 pooled it
11.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

211 citing papers in PubMed, 1 synthesis or guideline pooled it, 328 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Review
  5. Targeted and molecular therapies in Ewing sarcoma: a comprehensive review of preclinical and clinical advances.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Tissue-Specific Expression of the EWSR1::FLI1 Fusion Protein IdentifiesInternational journal of molecular sciences · 2026
    Article
  19. Article
  20. Article

151 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 1 country.

Aparna GorthiDepartment of Cell Systems and Anatomy, University of Texas Health at San Antonio, San Antonio, Texas 78229, USA.
July Carolina RomeroDepartment of Cell Systems and Anatomy, University of Texas Health at San Antonio, San Antonio, Texas 78229, USA.
Eva LorancGreehey Children's Cancer Research Institute, University of Texas Health at San Antonio, San Antonio, Texas 78229, USA.
Lin CaoGreehey Children's Cancer Research Institute, University of Texas Health at San Antonio, San Antonio, Texas 78229, USA.
Liesl A LawrenceDepartment of Cell Systems and Anatomy, University of Texas Health at San Antonio, San Antonio, Texas 78229, USA.
Elicia GoodaleGreehey Children's Cancer Research Institute, University of Texas Health at San Antonio, San Antonio, Texas 78229, USA.
Amanda Balboni IniguezDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts 02215, USA.
Xavier BernardDepartment of Cell Systems and Anatomy, University of Texas Health at San Antonio, San Antonio, Texas 78229, USA.
V Pragathi MasamsettiGreehey Children's Cancer Research Institute, University of Texas Health at San Antonio, San Antonio, Texas 78229, USA.
Sydney RostonDepartments of Oncology and Pediatrics, Georgetown University, Washington DC 20057, USA.
Elizabeth R LawlorDepartments of Pediatrics and Pathology, University of Michigan, Ann Arbor, Michigan 48109, USA.
Jeffrey A ToretskyDepartments of Oncology and Pediatrics, Georgetown University, Washington DC 20057, USA.
Kimberly StegmaierDepartment of Pediatric Oncology, Dana-Farber Cancer Institute and Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts 02215, USA.
Stephen L LessnickCenter for Childhood Cancer and Blood Diseases, Nationwide Children's Hospital, Columbus, Ohio 43205, USA.
Yidong ChenGreehey Children's Cancer Research Institute, University of Texas Health at San Antonio, San Antonio, Texas 78229, USA.
Alexander J R BishopDepartment of Cell Systems and Anatomy, University of Texas Health at San Antonio, San Antonio, Texas 78229, USA.
The University of Texas Health Science Center at San Antonio · USThe University of Texas at San Antonio · USGeorgetown University · USBoston Children's Hospital · USHarvard University · USNationwide Children's Hospital · USUniversity of Michigan–Ann Arbor · US

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Lei Zheng · 1991 to 2026
$59.1M
INSTITUTE FOR INTEGRATION OF MEDICINE & SCIENCE: A PARTNERSHIP TO IMPROVE HEALTHUL1RR025767 · NCRR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A · 2008 to 2011
$23.8M
Cancer Biology Training ProgramT32CA148724 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Pei Wang, Feng-Chun Yang · 2011 to 2026
$3.3M
Dissecting the Pathogenesis of Ewing Sarcoma with Integrative GenomicsR01CA204915 · NCI · DANA-FARBER CANCER INST · PI STEGMAIER, KIMBERLY, SWEET-CORDERO, ERIC ALEJANDRO · 2017 to 2021
$2.7M
Improving etoposide treatment of Ewing's sarcomaR01CA152063 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI BISHOP, ALEXANDER JAMES · 2011 to 2015
$1.5M
EWS/FLI AND ITS TARGETS IN EWING'S SARCOMAR01CA140394 · NCI · UNIVERSITY OF UTAH · PI LESSNICK, STEPHEN L. · 2010 to 2014
$1.5M
Comparing and contrasting the biology of damage survival at a genomic levelR15ES019128 · NIEHS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI BISHOP, ALEXANDER JAMES · 2010 to 2010
$446k
A screen for damage response genes using recombinationK22ES012264 · NIEHS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI BISHOP, ALEXANDER JAMES · 2004 to 2006
$321k
NCI NIH HHS P30 CA054174NCI NIH HHS R01 CA140394NCI NIH HHS R01 CA152063NCI NIH HHS R01 CA204915NCI NIH HHS T32 CA148724NCRR NIH HHS UL1 RR025767NIEHS NIH HHS K22 ES012264NIEHS NIH HHS R15 ES019128NIH HHS 1R01CA134605NIH HHS 1UL1RR025767-01
6 · The paper itself

Abstract

Ewing sarcoma is an aggressive paediatric cancer of the bone and soft tissue. It results from a chromosomal translocation, predominantly t(11;22)(q24:q12), that fuses the N-terminal transactivation domain of the constitutively expressed EWSR1 protein with the C-terminal DNA binding domain of the rarely expressed FLI1 protein. Ewing sarcoma is highly sensitive to genotoxic agents such as etoposide, but the underlying molecular basis of this sensitivity is unclear. Here we show that Ewing sarcoma cells display alterations in regulation of damage-induced transcription, accumulation of R-loops and increased replication stress. In addition, homologous recombination is impaired in Ewing sarcoma owing to an enriched interaction between BRCA1 and the elongating transcription machinery. Finally, we uncover a role for EWSR1 in the transcriptional response to damage, suppressing R-loops and promoting homologous recombination. Our findings improve the current understanding of EWSR1 function, elucidate the mechanistic basis of the sensitivity of Ewing sarcoma to chemotherapy (including PARP1 inhibitors) and highlight a class of BRCA-deficient-like tumours.

Indexed as

Gene Expression Regulation, NeoplasticNucleic Acid ConformationRecombinational DNA RepairTranscription, GeneticBRCA1 ProteinCell Line, TumorDNA DamageHumansOncogene Proteins, FusionProto-Oncogene Protein c-fli-1RNA-Binding Protein EWSSarcoma, EwingBRCA1 ProteinBRCA1 protein, humanEWS-FLI fusion proteinOncogene Proteins, FusionProto-Oncogene Protein c-fli-1RNA-Binding Protein EWS

Identifiers

PMID29513652
PMCPMC6318124
OpenAlexW2792813139

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.