Evidence map›Paper›PMID 29512051›Full record

ArticleJournal of the American Society for Mass Spectrometry2018

Characterization of ELISA Antibody-Antigen Interaction using Footprinting-Mass Spectrometry and Negative Staining Transmission Electron Microscopy.

Margaret Lin, Denise Krawitz, Matthew D Callahan, Galahad Deperalta, Aaron T Wecksler

Abstract read
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In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Margaret LinAnalytical Operations, Genentech Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Denise KrawitzCMC Paradigms LLC, 49 Oak Springs Drive, San Anselmo, CA, 94960, USA.
Matthew D CallahanProtein Analytical Chemistry, Genentech Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Galahad DeperaltaProtein Analytical Chemistry, Genentech Inc., 1 DNA Way, South San Francisco, CA, 94080, USA.
Aaron T WeckslerProtein Analytical Chemistry, Genentech Inc., 1 DNA Way, South San Francisco, CA, 94080, USA. wecksler.aaron@gene.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe epitope mapping data using multiple covalent labeling footprinting-mass spectrometry (MS) techniques coupled with negative stain transmission electron microscopy (TEM) data to analyze the antibody-antigen interactions in a sandwich enzyme-linked immunosorbant assay (ELISA). Our hydroxyl radical footprinting-MS data using fast photochemical oxidation of proteins (FPOP) indicates suppression of labeling across the antigen upon binding either of the monoclonal antibodies (mAbs) utilized in the ELISA. Combining these data with Western blot analysis enabled the identification of the putative epitopes that appeared to span regions containing N-linked glycans. An additional structural mapping technique, carboxyl group footprinting-mass spectrometry using glycine ethyl ester (GEE) labeling, was used to confirm the epitopes. Deglycosylation of the antigen resulted in loss of potency in the ELISA, supporting the FPOP and GEE labeling data by indicating N-linked glycans are necessary for antigen binding. Finally, mapping of the epitopes onto the antigen crystal structure revealed an approximate 90° relative spatial orientation, optimal for a noncompetitive binding ELISA. TEM data shows both linear and diamond antibody-antigen complexes with a similar binding orientation as predicted from the two footprinting-MS techniques. This study is the first of its kind to utilize multiple bottom-up footprinting-MS techniques and TEM visualization to characterize the monoclonal antibody-antigen binding interactions of critical reagents used in a quality control (QC) lot-release ELISA. Graphical Abstract ᅟ.

Indexed as

AnimalsAntibodies, MonoclonalCHO CellsCricetulusEnzyme-Linked Immunosorbent AssayEpitope MappingLysophospholipaseMass SpectrometryMiceMicroscopy, Electron, TransmissionModels, MolecularMolecular Docking SimulationNegative StainingProtein FootprintingAntibodies, MonoclonalLysophospholipaseCarboxyl-group footprinting-mass spectrometryConformational stabilityEnzyme-linked sandwich immunosorbant assay (ELISA)Fast photochemical oxidation of proteins (FPOP)GEE labelingHydroxyl-radical footprinting-mass spectrometryNegative staining transmission electron microscopy (TEM)Phospholipase B-like 2 (PLBL2)

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.