Evidence map›Paper›PMID 29511430›Full record

ArticleAmerican journal of translational research2018

The chemokine receptor CCR1 is identified in mast cell-derived exosomes.

Yuting Liang, Longwei Qiao, Xia Peng, Zelin Cui, Yue Yin, Huanjin Liao, Min Jiang, Li Li

Open access · greenAbstract read
In one paragraph

Article in American journal of translational research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 23 citations in OpenAlex.

  1. Mast cell-derived extracellular vesicles in lung diseases: roles in pulmonary inflammation, immune regulation, and microenvironmental remodeling.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2026
    Review
  2. Review
  3. Article
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  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Ligand-competent fractalkine receptor is expressed on exosomes.Biochemistry and biophysics reports · 2021
    Article
  11. Article
  12. Mast Cells Modulate Antigen-Specific CD8Frontiers in immunology · 2021
    Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Tetraspanins in the regulation of mast cell function.Medical microbiology and immunology · 2020
    Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yuting LiangDepartment of Laboratory Medicine, Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong UniversityShanghai 200080, China.
Longwei QiaoCenter for Reproduction and Genetics, Suzhou Hospital Affiliated to Nanjing Medical UniversitySuzhou 215002, Jiangsu, China.
Xia PengDepartment of Laboratory Medicine, Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong UniversityShanghai 200080, China.
Zelin CuiDepartment of Laboratory Medicine, Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong UniversityShanghai 200080, China.
Yue YinDepartment of Laboratory Medicine, Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong UniversityShanghai 200080, China.
Huanjin LiaoDepartment of Laboratory Medicine, Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong UniversityShanghai 200080, China.
Min JiangDepartment of Laboratory Medicine, Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong UniversityShanghai 200080, China.
Li LiDepartment of Laboratory Medicine, Shanghai General Hospital, School of Medicine, Shanghai Jiao Tong UniversityShanghai 200080, China.
Shanghai Jiao Tong University · CNNanjing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mast cells are important effector cells of the immune system, and mast cell-derived exosomes carrying RNAs play a role in immune regulation. However, the molecular function of mast cell-derived exosomes is currently unknown, and here, we identify differentially expressed genes (DEGs) in mast cells and exosomes. We isolated mast cells derived exosomes through differential centrifugation and screened the DEGs from mast cell-derived exosomes, using the GSE25330 array dataset downloaded from the Gene Expression Omnibus database. Biochemical pathways were analyzed by Gene ontology (GO) annotation and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway on the online tool DAVID. DEGs-associated protein-protein interaction networks (PPIs) were constructed using the STRING database and Cytoscape software. The genes identified from these bioinformatics analyses were verified by qRT-PCR and Western blot in mast cells and exosomes. We identified 2121 DEGs (843 up and 1278 down-regulated genes) in HMC-1 cell-derived exosomes and HMC-1 cells. The up-regulated DEGs were classified into two significant modules. The chemokine receptor CCR1 was screened as a hub gene and enriched in cytokine-mediated signaling pathway in module one. Seven genes, including CCR1, CD9, KIT, TGFBR1, TLR9, TPSAB1 and TPSB2 were screened and validated through qRT-PCR analysis. We have achieved a comprehensive view of the pivotal genes and pathways in mast cells and exosomes and identified CCR1 as a hub gene in mast cell-derived exosomes. Our results provide novel clues with respect to the biological processes through which mast cell-derived exosomes modulate immune responses.

Indexed as

bioinformatical analysisdifferentially expressed genesexosomesMast cells

Identifiers

PMID29511430
PMCPMC5835801
OpenAlexW2979272979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.