Evidence map›Paper›PMID 29511174›Full record

ArticleNature communications2018

Convergent genomic signatures of domestication in sheep and goats.

Florian J Alberto, Frédéric Boyer, Pablo Orozco-terWengel, Ian Streeter, Bertrand Servin, Pierre de Villemereuil, Badr Benjelloun, Pablo Librado, Filippo Biscarini, Licia Colli and 21 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 175 papers.

0numbers the graph read from it
0cells of the map it votes in
175citing papers in PubMed
23.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

175 citing papers in PubMed, 364 citations in OpenAlex.

  1. Article
  2. Review
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  14. Mapping genomic adaptation to environmental heterogeneity in Indian native goat populations through landscape genomics.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Article
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115 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 13 institutions in 9 countries.

Florian J AlbertoUniv. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, F-38000, Grenoble, France.
Frédéric BoyerUniv. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, F-38000, Grenoble, France.
Pablo Orozco-terWengelSchool of Biosciences, Cardiff University, Museum Avenue, CF10 3AX, Cardiff, Wales, UK.ORCID http://orcid.org/0000-0002-7951-4148
Ian StreeterEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.
Bertrand ServinGenPhySE, INRA, INPT, ENVT, Université de Toulouse, 31326, Castanet-Tolosan, France.
Pierre de VillemereuilUniv. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, F-38000, Grenoble, France.
Badr BenjellounUniv. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, F-38000, Grenoble, France.
Pablo LibradoCentre for GeoGenetics, Natural History Museum of Denmark, Øster Voldade 5-7, 1350K, Copenhagen, Denmark.
Filippo BiscariniPTP Science Park, Bioinformatics Unit, Via Einstein-Loc. Cascina Codazza, 26900, Lodi, Italy.ORCID http://orcid.org/0000-0002-3901-2354
Licia ColliIstituto di Zootecnica, Facoltà di Scienze Agrarie, Alimentari e Ambientali, Università Cattolica del S. Cuore, via Emilia Parmense n. 84, 29122, Piacenza (PC), Italy.
Mario BarbatoSchool of Biosciences, Cardiff University, Museum Avenue, CF10 3AX, Cardiff, Wales, UK.ORCID http://orcid.org/0000-0002-7203-1549
Wahid ZamaniUniv. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, F-38000, Grenoble, France.
Adriana AlbertiCEA - Institut de biologie François-Jacob, Genoscope, 2 rue Gaston Crémieux, 91057, Evry, France.ORCID http://orcid.org/0000-0003-3372-9423
Stefan EngelenCEA - Institut de biologie François-Jacob, Genoscope, 2 rue Gaston Crémieux, 91057, Evry, France.
Alessandra StellaPTP Science Park, Bioinformatics Unit, Via Einstein-Loc. Cascina Codazza, 26900, Lodi, Italy.
Stéphane JoostLaboratory of Geographic Information Systems (LASIG), School of Architecture, Civil and Environmental Engineering (ENAC), Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.ORCID http://orcid.org/0000-0002-1184-7501
Paolo Ajmone-MarsanIstituto di Zootecnica, Facoltà di Scienze Agrarie, Alimentari e Ambientali, Università Cattolica del S. Cuore, via Emilia Parmense n. 84, 29122, Piacenza (PC), Italy.
Riccardo NegriniBioDNA - Centro di Ricerca sulla Biodiversità e DNA Antico, Facoltà di Scienze Agrarie, Alimentarie e Ambientali, Università Cattolica del S. Cuore, via Emilia Parmense n. 84, 29122, Piacenza (PC), Italy.
Ludovic OrlandoCentre for GeoGenetics, Natural History Museum of Denmark, Øster Voldade 5-7, 1350K, Copenhagen, Denmark.
Hamid Reza RezaeiDepartment of Environmental Sci, Gorgan University of Agricultural Sciences & Natural Resources, 41996-13776, Gorgan, Iran.
Saeid NaderiEnvironmental Sciences Department, Natural Resources Faculty, University of Guilan, 49138-15749, Guilan, Iran.ORCID http://orcid.org/0000-0003-4918-208X
Laura ClarkeEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.ORCID http://orcid.org/0000-0002-5989-6898
Paul FlicekEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.ORCID http://orcid.org/0000-0002-3897-7955
Patrick WinckerCEA - Institut de biologie François-Jacob, Genoscope, 2 rue Gaston Crémieux, 91057, Evry, France.
Eric CoissacUniv. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, F-38000, Grenoble, France.
James KijasCSIRO Agriculture, 306 Carmody Road, St. Lucia, QLD, 4067, Australia.
Gwenola Tosser-KloppGenPhySE, INRA, INPT, ENVT, Université de Toulouse, 31326, Castanet-Tolosan, France.ORCID http://orcid.org/0000-0003-0550-4673
Abdelkader ChikhiInstitut National de la Recherche Agronomique Maroc (INRA-Maroc), Centre Régional d'Errachidia, Errachidia, 52000, Morocco.
Michael W BrufordSchool of Biosciences, Cardiff University, Museum Avenue, CF10 3AX, Cardiff, Wales, UK.
Pierre TaberletUniv. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, F-38000, Grenoble, France.
François PompanonUniv. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, F-38000, Grenoble, France. francois.pompanon@univ-grenoble-alpes.fr.ORCID http://orcid.org/0000-0003-4600-0172
Centre National de la Recherche Scientifique · FRUniversità Cattolica del Sacro Cuore · ITEuropean Bioinformatics Institute · GBCardiff University · GBCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRÉcole Nationale Vétérinaire de Toulouse · FRParco Tecnologico Padano · ITCommonwealth Scientific and Industrial Research Organisation · AUÉcole Polytechnique Fédérale de Lausanne · CHGorgan University of Agricultural Sciences and Natural Resources · IRInstitut National de la Recherche Agronomique · MANatural History Museum Aarhus · DKUniversity of Guilan · IR

Funding

Wellcome Trust
6 · The paper itself

Abstract

The evolutionary basis of domestication has been a longstanding question and its genetic architecture is becoming more tractable as more domestic species become genome-enabled. Before becoming established worldwide, sheep and goats were domesticated in the fertile crescent 10,500 years before present (YBP) where their wild relatives remain. Here we sequence the genomes of wild Asiatic mouflon and Bezoar ibex in the sheep and goat domestication center and compare their genomes with that of domestics from local, traditional, and improved breeds. Among the genomic regions carrying selective sweeps differentiating domestic breeds from wild populations, which are associated among others to genes involved in nervous system, immunity and productivity traits, 20 are common to Capra and Ovis. The patterns of selection vary between species, suggesting that while common targets of selection related to domestication and improvement exist, different solutions have arisen to achieve similar phenotypic end-points within these closely related livestock species.

Indexed as

DomesticationGenomeAnimalsAnimals, DomesticBiological EvolutionGenetic VariationGenomicsGoatsHaplotypesPhenotypePhylogenySelection, GeneticSheep, DomesticWhole Genome Sequencing

Identifiers

PMID29511174
PMCPMC5840369
OpenAlexW2793925946

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.