Evidence map›Paper›PMID 29511123›Full record

ArticleThe Journal of cell biology2018

Phosphorylation of IRE1 at S729 regulates RIDD in B cells and antibody production after immunization.

Chih-Hang Anthony Tang, Shiun Chang, Adrienne W Paton, James C Paton, Dmitry I Gabrilovich, Hidde L Ploegh, Juan R Del Valle, Chih-Chi Andrew Hu

Open access · hybridAbstract read
In one paragraph

Article in The Journal of cell biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 64 citations in OpenAlex.

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  17. Phosphorylation at SerThe Journal of biological chemistry · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Chih-Hang Anthony TangThe Wistar Institute, Philadelphia, PA.
Shiun ChangThe Wistar Institute, Philadelphia, PA.
Adrienne W PatonDepartment of Molecular and Cellular Biology, Research Centre for Infectious Diseases, University of Adelaide, Adelaide, Australia.ORCID 0000-0002-2996-5733
James C PatonDepartment of Molecular and Cellular Biology, Research Centre for Infectious Diseases, University of Adelaide, Adelaide, Australia.ORCID 0000-0001-9807-5278
Dmitry I GabrilovichThe Wistar Institute, Philadelphia, PA.ORCID 0000-0001-9913-6407
Hidde L PloeghProgram in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA.ORCID 0000-0002-1090-6071
Juan R Del ValleDepartment of Chemistry, University of South Florida, Tampa, FL.
Chih-Chi Andrew HuThe Wistar Institute, Philadelphia, PA Chu@wistar.org.ORCID 0000-0001-9024-2932
The Wistar Institute · USThe University of Adelaide · AUBoston Children's Hospital · USUniversity of South Florida · US

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Luis J Montaner · 1985 to 2026
$75.9M
Targeting ER stress response in B-cell chronic lymphocytic leukemiaR01CA163910 · NCI · WISTAR INSTITUTE · PI Chih-Chi Andrew Hu · 2013 to 2026
$4.8M
Mechanism of myeloid cell defect in cancerR01CA100062 · NCI · WISTAR INSTITUTE · PI GABRILOVICH, DMITRY I · 2004 to 2018
$4.0M
Pharmacological Blockage of XBP-1s Expression in CancerR01CA190860 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI DEL VALLE, JUAN R, HU, CHIH-CHI ANDREW · 2015 to 2019
$2.3M
Optimization and Efficacy of Covalent Ire-1 RNase Inhibitors in CLLR21CA199553 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI DEL VALLE, JUAN R · 2015 to 2016
$395k
NCI NIH HHS P30 CA010815NCI NIH HHS R01 CA100062NCI NIH HHS R01 CA163910NCI NIH HHS R01 CA190860NCI NIH HHS R21 CA199553
6 · The paper itself

Abstract

To relieve endoplasmic reticulum (ER) stress, IRE1 splices XBP1 messenger RNA (mRNA) or engages regulated IRE1-dependent decay (RIDD) of other mRNAs. Upon XBP1 deficiency, IRE1 switches to perform RIDD. We examined IRE1 in XBP1-deficient B cells and discovered that IRE1 undergoes phosphorylation at S729. We generated an anti-phospho-S729 antibody to investigate such phosphorylation. Compared with pharmacological ER stress inducers or Toll-like receptor ligands, the bacterial subtilase cytotoxin has an unusual capability in causing rapid and strong phosphorylation at S729 and triggering B cells to express spliced XBP1. To assess the function of S729 in IRE1, we generated S729A knock-in mice and found S729 is critically important for lipopolysaccharide-stimulated plasmablasts to respond to additional ER stress and for antibody production in response to immunization. We further crossed mice carrying an S729A mutation or ΔIRE1 (missing the kinase domain) with B cell-specific XBP1-deficient mice to trigger RIDD and discovered a critical role for S729 in regulating RIDD in B cells.

Indexed as

Antibody FormationImmunizationRNA StabilityAmino Acid SequenceAnimalsB-LymphocytesDithiothreitolEndoplasmic Reticulum StressImmunoglobulin GImmunoglobulin MLipopolysaccharidesMembrane ProteinsMice, Inbred C57BLModels, AnimalModels, BiologicalPhosphorylationDithiothreitolErn2 protein, mouseImmunoglobulin GImmunoglobulin MLipopolysaccharidesMembrane ProteinsPhosphoserineProtein Serine-Threonine KinasesX-Box Binding Protein 1Xbp1 protein, mouse

Identifiers

PMID29511123
PMCPMC5940306
OpenAlexW2789731901

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.