Evidence map›Paper›PMID 29510760›Full record

ArticleParasites & vectors2018

Cysteine peptidases of Eudiplozoon nipponicum: a broad repertoire of structurally assorted cathepsins L in contrast to the scarcity of cathepsins B in an invasive species of haematophagous monogenean of common carp.

Lucie Jedličková, Hana Dvořáková, Jan Dvořák, Martin Kašný, Lenka Ulrychová, Jiří Vorel, Vojtěch Žárský, Libor Mikeš

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. The Nϵ-Rule for Serine, but Not Cysteine Catalytic Triads.Angewandte Chemie (International ed. in English) · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Isoforms of Cathepsin B1 in Neurotropic Schistosomula ofFrontiers in cellular and infection microbiology · 2020
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Lucie JedličkováDepartment of Parasitology, Faculty of Science, Charles University, Viničná 7, 12844, Prague 2, Czech Republic. lucka.jedlickova@seznam.cz.ORCID 0000-0002-1811-9224
Hana DvořákováDepartment of Parasitology, Faculty of Science, Charles University, Viničná 7, 12844, Prague 2, Czech Republic.
Jan DvořákMedical Biology Centre, School of Biological Sciences, Queen's University Belfast, 97 Lisburn Road, Belfast, BT9 7BL, UK.
Martin KašnýDepartment of Parasitology, Faculty of Science, Charles University, Viničná 7, 12844, Prague 2, Czech Republic.
Lenka UlrychováDepartment of Parasitology, Faculty of Science, Charles University, Viničná 7, 12844, Prague 2, Czech Republic.
Jiří VorelDepartment of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37, Brno, Czech Republic.
Vojtěch ŽárskýDepartment of Parasitology, Faculty of Science, Charles University, Průmyslová 595, Vestec, 25250, Czech Republic.
Libor MikešDepartment of Parasitology, Faculty of Science, Charles University, Viničná 7, 12844, Prague 2, Czech Republic.
Charles University · CZMasaryk University · CZQueen's University Belfast · GB

Funding

Akademie Věd České Republiky RVO 61388963Grantová Agentura České Republiky GBP505/12/G112Grantová Agentura České Republiky P506/12/1258Masarykova Univerzita MUNI/A/1362/2016Ministerstvo Školství, Mládeže a Tělovýchovy CZ.02.1.01/0.0/0.0/16_019/0000759Ministerstvo Školství, Mládeže a Tělovýchovy InterBioMed LO1302Univerzita Karlova v Praze PROGRES Q43Univerzita Karlova v Praze SVV 244-260432/2017Univerzita Karlova v Praze UNCE 204017
6 · The paper itself

Abstract

backgroundCysteine peptidases of clan CA, family C1 account for a major part of proteolytic activity in the haematophagous monogenean Eudiplozoon nipponicum. The full spectrum of cysteine cathepsins is, however, unknown and their particular biochemical properties, tissue localisation, and involvement in parasite-host relationships are yet to be explored.

methodsSequences of cathepsins L and B (EnCL and EnCB) were mined from E. nipponicum transcriptome and analysed bioinformatically. Genes encoding two EnCLs and one EnCB were cloned and recombinant proteins produced in vitro. The enzymes were purified by chromatography and their activity towards selected substrates was characterised. Antibodies and specific RNA probes were employed for localisation of the enzymes/transcripts in tissues of E. nipponicum adults.

resultsTranscriptomic analysis revealed a set of ten distinct transcripts that encode EnCLs. The enzymes are significantly variable in their active sites, specifically the S2 subsites responsible for interaction with substrates. Some of them display unusual structural features that resemble cathepsins B and S. Two recombinant EnCLs had different pH activity profiles against both synthetic and macromolecular substrates, and were able to hydrolyse blood proteins and collagen I. They were localised in the haematin cells of the worm's digestive tract and in gut lumen. The EnCB showed similarity with cathepsin B2 of Schistosoma mansoni. It displays molecular features typical of cathepsins B, including an occluding loop responsible for its exopeptidase activity. Although the EnCB hydrolysed haemoglobin in vitro, it was localised in the vitelline cells of the parasite and not the digestive tract.

conclusionsTo our knowledge, this study represents the first complex bioinformatic and biochemical characterisation of cysteine peptidases in a monogenean. Eudiplozoon nipponicum adults express a variety of CLs, which are the most abundant peptidases in the worms. The properties and localisation of the two heterologously expressed EnCLs indicate a central role in the (partially extracellular?) digestion of host blood proteins. High variability of substrate-binding sites in the set of EnCLs suggests specific adaptation to a range of biological processes that require proteolysis. Surprisingly, a single cathepsin B is expressed by the parasite and it is not involved in digestion, but probably in vitellogenesis.

Indexed as

AnimalsCarpsCathepsin BCathepsin LGastrointestinal TractGene Expression ProfilingHost-Parasite InteractionsHydrolysisIntroduced SpeciesProteolysisRecombinant ProteinsTrematodaCathepsin BCathepsin LRecombinant ProteinsBlood digestionCathepsinCysteine peptidaseDiplozoidaeEudiplozoon nipponicumFish parasiteHaematophagyMonogeneaProteaseS2 subsite

Identifiers

PMID29510760
PMCPMC5840727
OpenAlexW2797216713

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.