Evidence map›Paper›PMID 29510659›Full record

ArticleBMC infectious diseases2018

Next generation sequencing based pathogen analysis in a patient with neurocysticercosis: a case report.

Ping Liu, Xing Weng, Jiajia Zhou, Xiaolin Xu, Fangping He, Yue Du, Honglong Wu, Yanping Gong, Guoping Peng

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC infectious diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
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  15. Subarachnoid neurocysticercosis: emerging concepts and treatment.Current opinion in infectious diseases · 2020
    Review
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  18. Application of metagenomic next-generation sequencing for bronchoalveolar lavage diagnostics in critically ill patients.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Ping LiuDepartment of Neurology, First Affiliated Hospital, Zhejiang University School of Medicine, 79 Qingchun Road, Hangzhou, 310003, China.
Xing WengBGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Yantian District, Shenzhen, Guangdong, 518083, China.
Jiajia ZhouDepartment of Neurology, First Affiliated Hospital, Zhejiang University School of Medicine, 79 Qingchun Road, Hangzhou, 310003, China.
Xiaolin XuBGI-Shanghai, 8th Floor, 26th Building, 3399 Lane, Kangxin Road, Pudong District, Shanghai, 200120, China.
Fangping HeDepartment of Neurology, First Affiliated Hospital, Zhejiang University School of Medicine, 79 Qingchun Road, Hangzhou, 310003, China.
Yue DuDepartment of Neurology, First Affiliated Hospital, Zhejiang University School of Medicine, 79 Qingchun Road, Hangzhou, 310003, China.
Honglong WuBinhai Genomics Institute, Tianjin Translational Genomics Center, BGI-Tianjin, Tianjin, 300308, China.
Yanping GongBinhai Genomics Institute, Tianjin Translational Genomics Center, BGI-Tianjin, Tianjin, 300308, China.
Guoping PengDepartment of Neurology, First Affiliated Hospital, Zhejiang University School of Medicine, 79 Qingchun Road, Hangzhou, 310003, China. guopingpeng@zju.edu.cn.
Zhejiang University · CNBGI Group (China) · CNFirst Affiliated Hospital Zhejiang University · CN

Funding

Natural Science Fund of Zhejiang Province Q13H090002the General science and technology project of Zhejiang Provincial Administration of Traditional Chinese Medicine 2015ZA048the National Key Technology R&D Program of China 2015BAI13B01
6 · The paper itself

Abstract

backgroundAccurate and early diagnosis of neurocysticercosis (NCC) remains a challenge due to the heterogeneity of its clinical, immunological and imaging characteristics. The presence of cysticercus DNA in cerebrospinal fluid (CSF) of NCC patients has been previously detected via conventional PCR assays. To the best of our knowledge, the use of CSF Next-Generation Sequencing (NGS) based pathogen analysis in patients with NCC infection has never been reported. CASE PRESENTATION: This study reports the clinical, imaging, and immunological features of a patient initially presenting with several months of headache who further developed a pure sensory stroke. NGS was used to detect the pathogen, and her CSF demonstrated the presence of Taenia solium-DNA. This finding was confirmed by a positive reaction to CSF cysticercosis antibodies. After antiparasitic treatment, secondary CSF NGS revealed the DNA index have dropped considerably compared to the initial NGS readings.

conclusionsNGS is a promising tool for the early and accurate diagnosis of central nervous system (CNS) infection, especially in the setting of atypical clinical manifestations. Further studies are required to evaluate the persistence of DNA in the CSF of patients.

Indexed as

AdultAnimalsAnthelminticsBrainDNA, HelminthFemaleHeadacheHigh-Throughput Nucleotide SequencingHumansMagnetic Resonance ImagingNeurocysticercosisPraziquantelStrokeTaenia soliumAnthelminticsDNA, HelminthPraziquantelHeadacheNeurocysticercosisNext generation sequencingSensory strokeTaenia solium

Identifiers

PMID29510659
PMCPMC5840791
OpenAlexW2795214267

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.