Evidence map›Paper›PMID 29507550›Full record

ArticleJournal of applied crystallography2018

Michał L Chodkiewicz, Szymon Migacz, Witold Rudnicki, Anna Makal, Jarosław A Kalinowski, Nigel W Moriarty, Ralf W Grosse-Kunstleve, Pavel V Afonine, Paul D Adams, Paulina Maria Dominiak

Open access · bronzeAbstract read
In one paragraph

Article in Journal of applied crystallography, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Towards routine accurate electron-density studies of biological macromolecules.Acta crystallographica. Section D, Structural biology · 2026
    Article
  4. From atoms to a data bank: optimizing transferability of electron-density symmetry.Acta crystallographica. Section A, Foundations and advances · 2026
    Article
  5. Measurement of atomic scattering factors by cryoelectron microscopy.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Journal of applied crystallography · 2026
    Article
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  19. Current developments and trends in quantum crystallography.Acta crystallographica Section B, Structural science, crystal engineering and materials · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Michał L ChodkiewiczBiological and Chemical Research Centre, Department of Chemistry, University of Warsaw, ulica Żwirki i Wigury 101, Warszawa, 02-089, Poland.
Szymon MigaczInterdisciplinary Centre for Mathematical and Computational Modelling, University of Warsaw, Warsaw, Poland.
Witold RudnickiInterdisciplinary Centre for Mathematical and Computational Modelling, University of Warsaw, Warsaw, Poland.ORCID https://orcid.org/0000-0002-7928-4944
Anna MakalBiological and Chemical Research Centre, Department of Chemistry, University of Warsaw, ulica Żwirki i Wigury 101, Warszawa, 02-089, Poland.
Jarosław A KalinowskiMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA.
Nigel W MoriartyMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA.
Ralf W Grosse-KunstlevePhysical Biosciences Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA.
Pavel V AfonineMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA.
Paul D AdamsMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720, USA.
Paulina Maria DominiakBiological and Chemical Research Centre, Department of Chemistry, University of Warsaw, ulica Żwirki i Wigury 101, Warszawa, 02-089, Poland.ORCID https://orcid.org/0000-0002-1466-1243
Lawrence Berkeley National Laboratory · USUniversity of Warsaw · PLUniversity of Białystok · PL

Funding

PROJECT 5 - DUKE - STRUCTURE VALIDATION AND IMPROVEMENT FOR PROTEINS AND N. ACIDSP01GM063210 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI ADAMS, PAUL DAVID · 2001 to 2021
$33.5M
NIGMS NIH HHS P01 GM063210
6 · The paper itself

Abstract

It has been recently established that the accuracy of structural parameters from X-ray refinement of crystal structures can be improved by using a bank of aspherical pseudoatoms instead of the classical spherical model of atomic form factors. This comes, however, at the cost of increased complexity of the underlying calculations. In order to facilitate the adoption of this more advanced electron density model by the broader community of crystallographers, a new software implementation called

Indexed as

GPUmultipole modelrefinementstructure factors

Identifiers

PMID29507550
PMCPMC5822993
OpenAlexW2773726907

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.