Evidence map›Paper›PMID 29507183›Full record

ArticleMolecular and cellular biology2018

AMPK Inhibits ULK1-Dependent Autophagosome Formation and Lysosomal Acidification via Distinct Mechanisms.

Chinwendu Nwadike, Leon E Williamson, Laura E Gallagher, Jun-Lin Guan, Edmond Y W Chan

Open access · hybridAbstract read
In one paragraph

Article in Molecular and cellular biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 1 pooled it
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 1 synthesis or guideline pooled it, 106 citations in OpenAlex.

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  11. The AMPK Pathway: Molecular Rejuvenation of Metabolism and Mitochondria.Annual review of cell and developmental biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Chinwendu Nwadike *Strathclyde Institute for Pharmacy and Biomedical Sciences. University of Strathclyde, Glasgow, Scotland.
Leon E Williamson *Strathclyde Institute for Pharmacy and Biomedical Sciences. University of Strathclyde, Glasgow, Scotland.
Laura E GallagherStrathclyde Institute for Pharmacy and Biomedical Sciences. University of Strathclyde, Glasgow, Scotland.
Jun-Lin GuanDepartment of Cancer Biology, University of Cincinnati College of Medicine, Cincinnati, Ohio, USA.
Edmond Y W ChanStrathclyde Institute for Pharmacy and Biomedical Sciences. University of Strathclyde, Glasgow, Scotland Edmond.Chan@Strath.ac.uk.
University of Strathclyde · GBQueen's University · CAUniversity of Cincinnati Medical Center · US

Funding

Regulation of Neural Stem Cells and Neurogenesis by Autophagy GenesR01NS094144 · NINDS · UNIVERSITY OF CINCINNATI · PI GUAN, JUN-LIN · 2015 to 2024
$3.6M
Biotechnology and Biological Sciences Research Council BB/F017642/1Cancer Research UKNINDS NIH HHS R01 NS094144
6 · The paper itself

Abstract

Autophagy maintains metabolism in response to starvation, but each nutrient is sensed distinctly. Amino acid deficiency suppresses mechanistic target of rapamycin complex 1 (MTORC1), while glucose deficiency promotes AMP-activated protein kinase (AMPK). The MTORC1 and AMPK signaling pathways converge onto the ULK1/2 autophagy initiation complex. Here, we show that amino acid starvation promoted formation of ULK1- and sequestosome 1/p62-positive early autophagosomes. Autophagosome initiation was controlled by MTORC1 sensing glutamine, leucine, and arginine levels together. In contrast, glucose starvation promoted AMPK activity, phosphorylation of ULK1 Ser555, and LC3-II accumulation, but with dynamics consistent with a block in autophagy flux. We studied the flux pathway and found that starvation of amino acid but not of glucose activated lysosomal acidification, which occurred independently of autophagy and ULK1. In addition to lack of activation, glucose starvation inhibited the ability of amino acid starvation to activate both autophagosome formation and the lysosome. Activation of AMPK and phosphorylation of ULK1 were determined to specifically inhibit autophagosome formation. AMPK activation also was sufficient to prevent lysosome acidification. These results indicate concerted but distinct AMPK-dependent mechanisms to suppress early and late phases of autophagy.

Indexed as

Amino AcidsAMP-Activated Protein KinasesAnimalsAutophagosomesAutophagyAutophagy-Related Protein-1 HomologCell Line, TumorGlucoseHEK293 CellsHeLa CellsHumansIntracellular Signaling Peptides and ProteinsLysosomesMechanistic Target of Rapamycin Complex 1MicePhosphorylationAmino AcidsAMP-Activated Protein KinasesAutophagy-Related Protein-1 HomologGlucoseIntracellular Signaling Peptides and ProteinsMechanistic Target of Rapamycin Complex 1Protein Serine-Threonine KinasesTOR Serine-Threonine KinasesULK1 protein, humanUlk2 protein, humanamino acid starvationAMPKarginineautophagyglucose starvationglutamineleucinelysosome acidificationMTORC1ULK1

Identifiers

PMID29507183
PMCPMC5954193
OpenAlexW2788488195

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.