Evidence map›Paper›PMID 29507098›Full record

ArticleThe Journal of biological chemistry2018

Ligand- and cation-induced structural alterations of the leukocyte integrin LFA-1.

Mehmet Sen, Adem C Koksal, Koichi Yuki, Jianchuan Wang, Timothy A Springer

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Mehmet SenFrom the Program in Cellular and Molecular Medicine and msen2@central.uh.edu.
Adem C KoksalFrom the Program in Cellular and Molecular Medicine and.
Koichi YukiDepartment of Anesthesiology, Perioperative and Pain Medicine, Boston Children's Hospital, Boston, Massachusetts 02115.
Jianchuan WangFrom the Program in Cellular and Molecular Medicine and.
Timothy A SpringerFrom the Program in Cellular and Molecular Medicine and Springer_lab@crystal.harvard.edu.
Harvard University · USBoston Children's Hospital · USUniversity of Houston · US

Funding

LYMPHOCYTE FUNCTION ASSOCIATED ANTIGENSR37CA031798 · NCI · IMMUNE DISEASE INSTITUTE, INC. · PI SPRINGER, TIMOTHY A · 2004 to 2013
$8.3M
LYMPHOCYTE FUNCTION-ASSOCIATED ANTIGENSR01CA031798 · NCI · IMMUNE DISEASE INSTITUTE, INC. · PI SPRINGER, TIMOTHY A · 1985 to 2018
$5.1M
The impact of anesthetic selection on sepsis outcome and its mechanismR01GM118277 · NIGMS · BOSTON CHILDREN'S HOSPITAL · PI YUKI, KOICHI · 2016 to 2020
$1.8M
NCI NIH HHS R01 CA031798NCI NIH HHS R37 CA031798NIGMS NIH HHS R01 GM118277
6 · The paper itself

Abstract

In αI integrins, including leukocyte function-associated antigen 1 (LFA-1), ligand-binding function is delegated to the αI domain, requiring extra steps in the relay of signals that activate ligand binding and coordinate it with cytoplasmic signals. Crystal structures reveal great variation in orientation between the αI domain and the remainder of the integrin head. Here, we investigated the mechanisms involved in signal relay to the αI domain, including whether binding of the ligand intercellular adhesion molecule-1 (ICAM-1) to the αI domain is linked to headpiece opening and engenders a preferred αI domain orientation. Using small-angle X-ray scattering and negative-stain EM, we define structures of ICAM-1, LFA-1, and their complex, and the effect of activation by Mn

Indexed as

HEK293 CellsHumansIntercellular Adhesion Molecule-1Lymphocyte Function-Associated Antigen-1MagnesiumManganeseProtein DomainsProtein Structure, QuaternaryX-Ray DiffractionICAM1 protein, humanIntercellular Adhesion Molecule-1Lymphocyte Function-Associated Antigen-1MagnesiumManganeseallosterycell adhesionconformationelectron microscopy (EM)integrinleukocytesmall-angle X-ray scattering (SAXS)

Identifiers

PMID29507098
PMCPMC5925802
OpenAlexW2794400334

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.