Evidence map›Paper›PMID 29505642›Full record

ArticleThe plant genome2018

Single Nucleotide Polymorphism Markers Associated with Seed Quality Characteristics of Cultivated Lentil.

Hamid Khazaei, Michael Fedoruk, Carolyn T Caron, Albert Vandenberg, Kirstin E Bett

Abstract read
In one paragraph

Article in The plant genome, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hamid Khazaei
Michael Fedoruk
Carolyn T Caron
Albert Vandenberg
Kirstin E Bett

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The dimensions of lentil ( Medik.) seeds are important quality parameters that are major determinants of market preference, cooking time, and post-harvest milling quality. Knowledge of the genetic control of traits related to seed dimensions would be useful for crop improvement. The principal aim of this study was to identify single nucleotide polymorphism (SNP) markers linked to genes that control seed diameter, seed thickness, and seed plumpness. Association mapping analysis with SNP markers was used to study the seed dimensions of 138 diverse cultivated lentil accessions grown at two locations in Saskatchewan, Canada, in 2011 and 2012. Six marker-trait associations were shown to be significant for the studied seed dimension characteristics. Two SNP markers closely associated with seed diameter across locations and years identified in previous work were validated in this study. Three additional marker-seed thickness associations were identified. Using the association mapping strategy, we confirmed the presence of two genomic regions controlling seed diameter and plumpness. This information can be used worldwide as a resource for lentil seed quality improvement programs.

Indexed as

Polymorphism, Single NucleotideGenetics, PopulationLens PlantPhenotypeSaskatchewanSeeds

Identifiers

PMID29505642
PMCPMC12962556

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.