Evidence map›Paper›PMID 29505615›Full record

ArticlePloS one2018

Circulating miRNAs, isomiRs and small RNA clusters in human plasma and breast milk.

Mercedes Rubio, Mariona Bustamante, Carles Hernandez-Ferrer, Dietmar Fernandez-Orth, Lorena Pantano, Yaris Sarria, Maria Piqué-Borras, Kilian Vellve, Silvia Agramunt, Ramon Carreras and 3 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 1 synthesis or guideline pooled it, 72 citations in OpenAlex.

  1. Pooled it
  2. Maternal Obesity and MicroRNAs in Breast Milk: Implications for Infant Developmental Programming.Obesity reviews : an official journal of the International Association for the Study of Obesity · 2026
    Review
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  7. Article
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  10. Article
  11. Article
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  15. miRNA in head and neck squamous cell carcinomas: promising but still distant future of personalized oncology.Reports of practical oncology and radiotherapy : journal of Greatpoland Cancer Center in Poznan and Polish Society of Radiation Oncology · 2023
    Review
  16. Review
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  18. Article
  19. Review
  20. An Insight into miR-1290: An Oncogenic miRNA with Diagnostic Potential.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 9 institutions in 5 countries.

Mercedes RubioISGlobal, Barcelona Ctr. Int. Health Res. (CRESIB), Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.ORCID 0000-0002-4331-3280
Mariona BustamanteISGlobal, Centre for Research in Environmental Epidemiology (CREAL), Barcelona, Spain.
Carles Hernandez-FerrerISGlobal, Centre for Research in Environmental Epidemiology (CREAL), Barcelona, Spain.
Dietmar Fernandez-OrthISGlobal, Centre for Research in Environmental Epidemiology (CREAL), Barcelona, Spain.
Lorena PantanoHarvard TH Chan School of Public Health, Boston, MA, United States of America.
Yaris SarriaMicroarray Analysis Service, IMIM (Hospital del Mar Medical Research Institute), Barcelona, Spain.
Maria Piqué-BorrasLaboratory of Childhood Leukemia, Department of Biomedicine, University of Basel and Basel University Children's Hospital, Hebelestrasse, Basel, Switzerland.
Kilian VellveObstetrics and Gynaecology Department, Hospital del Mar, Parc de Salut Mar, Barcelona, Spain.
Silvia AgramuntObstetrics and Gynaecology Department, Hospital del Mar, Parc de Salut Mar, Barcelona, Spain.
Ramon CarrerasObstetrics and Gynaecology Department, Hospital del Mar, Parc de Salut Mar, Barcelona, Spain.
Xavier EstivillGenetics of Child and Woman's Health Group, Research Department, Sidra Medical and Research Center, Doha, Qatar.
Juan R GonzalezISGlobal, Centre for Research in Environmental Epidemiology (CREAL), Barcelona, Spain.
Alfredo MayorISGlobal, Barcelona Ctr. Int. Health Res. (CRESIB), Hospital Clínic-Universitat de Barcelona, Barcelona, Spain.
Universitat Pompeu Fabra · ESParc de Salut · ESBarcelona Institute for Global Health · ESHarvard University · USHospital Del Mar · ESHospital Universitario Dexeus · ESManhiça Health Research Centre · MZUniversitat Autònoma de Barcelona · ESUniversity of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Circulating small RNAs, including miRNAs but also isomiRs and other RNA species, have the potential to be used as non-invasive biomarkers for communicable and non-communicable diseases. This study aims to characterize and compare small RNA profiles in human biofluids. For this purpose, RNA was extracted from plasma and breast milk samples from 15 healthy postpartum mothers. Small RNA libraries were prepared with the NEBNext® small RNA library preparation kit and sequenced in an Illumina HiSeq2000 platform. miRNAs, isomiRs and clusters of small RNAs were annotated using seqBuster/seqCluster framework in 5 plasma and 10 milk samples that passed the initial quality control. The RNA yield was 81 ng/mL [standard deviation (SD): 41] and 3985 ng/mL (SD: 3767) for plasma and breast milk, respectively. Mean number of good quality reads was 4.04 million (M) (40.01% of the reads) in plasma and 12.5M (89.6%) in breast milk. One thousand one hundred eighty two miRNAs, 12,084 isomiRs and 1,053 small RNA clusters that included piwi-interfering RNAs (piRNAs), tRNAs, small nucleolar RNAs (snoRNA) and small nuclear RNAs (snRNAs) were detected. Samples grouped by biofluid, with 308 miRNAs, 1,790 isomiRs and 778 small RNA clusters differentially detected. In summary, plasma and milk showed a different small RNA profile. In both, miRNAs, piRNAs, tRNAs, snRNAs, and snoRNAs were identified, confirming the presence of non-miRNA species in plasma, and describing them for the first time in milk.

Indexed as

AdultFemaleHealthy VolunteersHumansMaleMicroRNAsMilk, HumanYoung AdultMicroRNAs

Identifiers

PMID29505615
PMCPMC5837101
OpenAlexW2790152170

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.