Evidence map›Paper›PMID 29500726›Full record

ArticleAMB Express2018

Biological conversion of aromatic monolignol compounds by a Pseudomonas isolate from sediments of the Baltic Sea.

Krithika Ravi, Javier García-Hidalgo, Matthias Nöbel, Marie F Gorwa-Grauslund, Gunnar Lidén

Abstract read
In one paragraph

Article in AMB Express, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Article
  3. Four NovelViruses · 2023
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Vanillin Production inApplied and environmental microbiology · 2020
    Article
  10. Review
  11. Genomic analysis ofBiotechnology for biofuels · 2019
    Article
  12. Review
  13. Bacterial conversion of depolymerized Kraft lignin.Biotechnology for biofuels · 2019
    Article
  14. Bacterial conversion of depolymerized Kraft lignin.Biotechnology for biofuels · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Krithika RaviDepartment of Chemical Engineering, Lund University, P.O. Box 124, 221 00, Lund, Sweden.
Javier García-HidalgoDepartment of Chemistry, Applied Microbiology, Lund University, P.O. Box 124, 221 00, Lund, Sweden. javier.garcia_hidalgo@tmb.lth.se.ORCID http://orcid.org/0000-0002-1909-847X
Matthias NöbelDepartment of Chemical Engineering, Lund University, P.O. Box 124, 221 00, Lund, Sweden.
Marie F Gorwa-GrauslundDepartment of Chemistry, Applied Microbiology, Lund University, P.O. Box 124, 221 00, Lund, Sweden.
Gunnar LidénDepartment of Chemical Engineering, Lund University, P.O. Box 124, 221 00, Lund, Sweden.

Funding

Stiftelsen för Strategisk Forskning RBP14-0052
6 · The paper itself

Abstract

Bacterial strains were isolated from the sediments of the Baltic Sea using ferulic acid, guaiacol or a lignin-rich softwood waste stream as substrate. In total nine isolates were obtained, five on ferulic acid, two on guaiacol and two on a lignin-rich softwood stream as a carbon source. Three of the isolates were found to be Pseudomonas sp. based on 16S rRNA sequencing. Among them, isolate 9.1, which showed the fastest growth in defined M9 medium, was tentatively identified as a Pseudomonas deceptionensis strain based on the gyrB sequencing. The growth of isolate 9.1 was further examined on six selected lignin model compounds (ferulate, p-coumarate, benzoate, syringate, vanillin and guaiacol) from different upper funneling aromatic pathways and was found able to grow on four out of these six compounds. No growth was detected on syringate and guaiacol. The highest specific growth and uptake rates were observed for benzoate (0.3 h

Indexed as

Bacterial aromatic catabolismMonolignolsPseudomonasSediment isolatesVanillyl alcohol

Identifiers

PMID29500726
PMCPMC5834416

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.