Evidence map›Paper›PMID 29500443›Full record

ArticleScientific reports2018

Improved isolation strategies to increase the yield and purity of human urinary exosomes for biomarker discovery.

Ali Hashemi Gheinani, Mike Vögeli, Ulrich Baumgartner, Erik Vassella, Annette Draeger, Fiona C Burkhard, Katia Monastyrskaya

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers.

0numbers the graph read from it
0cells of the map it votes in
114citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

114 citing papers in PubMed.

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  16. Exosomes in cartilage microenvironment regulation and cartilage repair.Frontiers in cell and developmental biology · 2025
    Review
  17. Extracellular Vesicles as Biomarkers of Pregnancy Complications.International journal of molecular sciences · 2024
    Review
  18. Uromodulin and the study of urinary extracellular vesicles.Journal of extracellular biology · 2024
    Review
  19. Review
  20. Review

54 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ali Hashemi GheinaniUrology Research Laboratory, Department for BioMedical Research, University of Bern, Bern, Switzerland.
Mike VögeliUrology Research Laboratory, Department for BioMedical Research, University of Bern, Bern, Switzerland.
Ulrich BaumgartnerInstitute of Pathology, University of Bern, Bern, Switzerland.
Erik VassellaInstitute of Pathology, University of Bern, Bern, Switzerland.
Annette DraegerInstitute of Anatomy, University of Bern, Bern, Switzerland.
Fiona C BurkhardUrology Research Laboratory, Department for BioMedical Research, University of Bern, Bern, Switzerland.ORCID 0000-0002-8271-014X
Katia MonastyrskayaUrology Research Laboratory, Department for BioMedical Research, University of Bern, Bern, Switzerland. monastyk@dbmr.unibe.ch.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Circulating miRNAs are detected in extracellular space and body fluids such as urine. Circulating RNAs can be packaged in secreted urinary extracellular vesicles (uEVs) and thus protected from degradation. Urinary exosome preparations might contain specific miRNAs, relevant as biomarkers in renal and bladder diseases. Major difficulties in application of uEVs into the clinical environment are the high variability and low reproducibility of uEV isolation methods. Here we used five different methods to isolate uEVs and compared the size distribution, morphology, yield, presence of exosomal protein markers and RNA content of uEVs. We present an optimized ultracentrifugation and size exclusion chromatography approach for highly reproducible isolation for 50-150 nm uEVs, corresponding to the exosomes, from 50 ml urine. We profiled the miRNA content of uEVs and total urine from the same samples with the NanoString platform and validated the data using qPCR. Our results indicate that 18 miRNAs, robustly detected in uEVs were always present in the total urine. However, 15 miRNAs could be detected only in the total urine preparations and might represent naked circulating miRNA species. This is a novel unbiased and reproducible strategy for uEVs isolation, content normalization and miRNA cargo analysis, suitable for biomarker discovery studies.

Indexed as

UrineBiomarkersChromatography, GelExosomesHumansMicroRNAsReal-Time Polymerase Chain ReactionUltracentrifugationBiomarkersMicroRNAs

Identifiers

PMID29500443
PMCPMC5834546

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.