Evidence map›Paper›PMID 29500232›Full record

ArticleThe Biochemical journal2018

Heme degradation enzyme biliverdin IXβ reductase is required for stem cell glutamine metabolism.

Zongdong Li, Natasha M Nesbitt, Lisa E Malone, Dimitri V Gnatenko, Song Wu, Daifeng Wang, Wei Zhu, Geoffrey D Girnun, Wadie F Bahou

Open access · greenAbstract read
In one paragraph

Article in The Biochemical journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Zongdong LiDepartment of Medicine, Stony Brook University, Stony Brook, NY 11794, U.S.A. zongdong.li@stonybrookmedicine.edu.
Natasha M NesbittDepartment of Medicine, Stony Brook University, Stony Brook, NY 11794, U.S.A.
Lisa E MaloneDepartment of Medicine, Stony Brook University, Stony Brook, NY 11794, U.S.A.
Dimitri V GnatenkoDepartment of Medicine, Stony Brook University, Stony Brook, NY 11794, U.S.A.
Song WuDepartment of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794, U.S.A.
Daifeng WangDepartment of Biomedical Informatics, Stony Brook University, Stony Brook, NY 11794, U.S.A.
Wei ZhuDepartment of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794, U.S.A.
Geoffrey D GirnunDepartment of Pathology, Stony Brook University, Stony Brook, NY 11794, U.S.A.
Wadie F BahouDepartment of Medicine, Stony Brook University, Stony Brook, NY 11794, U.S.A.
Stony Brook University · US

Funding

Platelet Systems Biology in Health and DiseaseR01HL119096 · NHLBI · STATE UNIVERSITY NEW YORK STONY BROOK · PI BAHOU, WADIE F · 2015 to 2019
$3.5M
Genetic dissection of the platelet thrombohemorrhagic phenotypeR01HL091939 · NHLBI · STATE UNIVERSITY NEW YORK STONY BROOK · PI BAHOU, WADIE F · 2009 to 2012
$1.6M
Acquisition of an Applied Biosystems 4000 QTRAP Mass SpectrometerS10RR023680 · NCRR · STATE UNIVERSITY NEW YORK STONY BROOK · PI IDEN, CHARLES R · 2007 to 2007
$435k
HLS-Detection of RNA biomarkers in individual plateletsR43AG059277 · NIA · BLOOD CELL TECHNOLOGIES, LLC · PI GNATENKO, DMITRI V · 2017 to 2017
$243k
Development of a biliverdin IX Beta reductase redox inhibitor for enhanced platelet productionR43HL129545 · NHLBI · BLOOD CELL TECHNOLOGIES, LLC · PI NESBITT, NATASHA M. · 2015 to 2015
$221k
NCRR NIH HHS S10 RR023680NHLBI NIH HHS R01 HL091939NHLBI NIH HHS R01 HL119096NHLBI NIH HHS R43 HL129545NIA NIH HHS R43 AG059277
6 · The paper itself

Abstract

Bioenergetic requirements of hematopoietic stem cells and pluripotent stem cells (PSCs) vary with lineage fate, and cellular adaptations rely largely on substrate (glucose/glutamine) availability and mitochondrial function to balance tricarboxylic acid (TCA)-derived anabolic and redox-regulated antioxidant functions. Heme synthesis and degradation converge in a linear pathway that utilizes TCA cycle-derived carbon in cataplerotic reactions of tetrapyrrole biosynthesis, terminated by NAD(P)H-dependent biliverdin reductases (IXα, BLVRA and IXβ, BLVRB) that lead to bilirubin generation and cellular antioxidant functions. We now demonstrate that PSCs with targeted deletion of

Indexed as

Cells, CulturedEmbryonic Stem CellsEnergy MetabolismGene Knock-In TechniquesGlucoseGlutamineGlycolysisHemeHumansOxidoreductases Acting on CH-CH Group DonorsPentose Phosphate PathwaySubstrate Specificitybiliverdin reductaseGlucoseGlutamineHemeOxidoreductases Acting on CH-CH Group DonorsBLVRBglutamineheme

Identifiers

PMID29500232
PMCPMC8278628
OpenAlexW2790177108

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.