Evidence map›Paper›PMID 29499165›Full record

ArticleAmerican journal of human genetics2018

Ectopic GRHL2 Expression Due to Non-coding Mutations Promotes Cell State Transition and Causes Posterior Polymorphous Corneal Dystrophy 4.

Petra Liskova, Lubica Dudakova, Cerys J Evans, Karla E Rojas Lopez, Nikolas Pontikos, Dimitra Athanasiou, Hodan Jama, Josef Sach, Pavlina Skalicka, Viktor Stranecky and 7 more

Open access · hybridAbstract read
In one paragraph

Article in American journal of human genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Association Analysis of SNPs inAnimals : an open access journal from MDPI · 2025
    Article
  4. Review
  5. Article
  6. Disruption ofHuman mutation · 2024
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Update on the genetics of corneal endothelial dystrophies.Indian journal of ophthalmology · 2022
    Review
  13. Review
  14. [Diagnostics, clinical aspects and genetics of congenital corneal opacities].Der Ophthalmologe : Zeitschrift der Deutschen Ophthalmologischen Gesellschaft · 2022
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Diseases of the corneal endothelium.Experimental eye research · 2021
    Review
  20. NovelGenes · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Petra LiskovaResearch Unit for Rare Diseases, Department of Paediatrics and Adolescent Medicine, First Faculty of Medicine, Charles University and General University Hospital in Prague, Ke Karlovu 2, Prague 128 08, Czech Republic; Department of Ophthalmology, First Faculty of Medicine, Charles University and General University Hospital in Prague, U Nemocnice 2, Prague 128 08, Czech Republic; UCL Institute of Ophthalmology, University College London, London EC1V 9EL, UK. Electronic address: petra.liskova@lf1.cuni.cz.
Lubica DudakovaResearch Unit for Rare Diseases, Department of Paediatrics and Adolescent Medicine, First Faculty of Medicine, Charles University and General University Hospital in Prague, Ke Karlovu 2, Prague 128 08, Czech Republic.
Cerys J EvansUCL Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
Karla E Rojas LopezUCL Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
Nikolas PontikosUCL Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
Dimitra AthanasiouUCL Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
Hodan JamaUCL Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
Josef SachInstitute of Pathology, Third Faculty of Medicine, Charles University, Faculty Hospital Kralovske Vinohrady, Srobarova 50, Prague 100 34, Czech Republic.
Pavlina SkalickaResearch Unit for Rare Diseases, Department of Paediatrics and Adolescent Medicine, First Faculty of Medicine, Charles University and General University Hospital in Prague, Ke Karlovu 2, Prague 128 08, Czech Republic; Department of Ophthalmology, First Faculty of Medicine, Charles University and General University Hospital in Prague, U Nemocnice 2, Prague 128 08, Czech Republic.
Viktor StraneckyResearch Unit for Rare Diseases, Department of Paediatrics and Adolescent Medicine, First Faculty of Medicine, Charles University and General University Hospital in Prague, Ke Karlovu 2, Prague 128 08, Czech Republic.
Stanislav KmochResearch Unit for Rare Diseases, Department of Paediatrics and Adolescent Medicine, First Faculty of Medicine, Charles University and General University Hospital in Prague, Ke Karlovu 2, Prague 128 08, Czech Republic.
Caroline ThaungUCL Institute of Ophthalmology, University College London, London EC1V 9EL, UK; Moorfields Eye Hospital, London EC1V 2PD, UK.
Martin FilipecDepartment of Ophthalmology, First Faculty of Medicine, Charles University and General University Hospital in Prague, U Nemocnice 2, Prague 128 08, Czech Republic.
Michael E CheethamUCL Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
Alice E DavidsonUCL Institute of Ophthalmology, University College London, London EC1V 9EL, UK.
Stephen J TuftMoorfields Eye Hospital, London EC1V 2PD, UK.
Alison J HardcastleUCL Institute of Ophthalmology, University College London, London EC1V 9EL, UK; Moorfields Eye Hospital, London EC1V 2PD, UK. Electronic address: a.hardcastle@ucl.ac.uk.
University College London · GBGeneral University Hospital in Prague · CZCharles University · CZMoorfields Eye Hospital · GB

Funding

Wellcome Trust 205041/Z/16/Z
6 · The paper itself

Abstract

In a large family of Czech origin, we mapped a locus for an autosomal-dominant corneal endothelial dystrophy, posterior polymorphous corneal dystrophy 4 (PPCD4), to 8q22.3-q24.12. Whole-genome sequencing identified a unique variant (c.20+544G>T) in this locus, within an intronic regulatory region of GRHL2. Targeted sequencing identified the same variant in three additional previously unsolved PPCD-affected families, including a de novo occurrence that suggests this is a recurrent mutation. Two further unique variants were identified in intron 1 of GRHL2 (c.20+257delT and c.20+133delA) in unrelated PPCD-affected families. GRHL2 is a transcription factor that suppresses epithelial-to-mesenchymal transition (EMT) and is a direct transcriptional repressor of ZEB1. ZEB1 mutations leading to haploinsufficiency cause PPCD3. We previously identified promoter mutations in OVOL2, a gene not normally expressed in the corneal endothelium, as the cause of PPCD1. OVOL2 drives mesenchymal-to-epithelial transition (MET) by directly inhibiting EMT-inducing transcription factors, such as ZEB1. Here, we demonstrate that the GRHL2 regulatory variants identified in PPCD4-affected individuals induce increased transcriptional activity in vitro. Furthermore, although GRHL2 is not expressed in corneal endothelial cells in control tissue, we detected GRHL2 in the corneal "endothelium" in PPCD4 tissue. These cells were also positive for epithelial markers E-Cadherin and Cytokeratin 7, indicating they have transitioned to an epithelial-like cell type. We suggest that mutations inducing MET within the corneal endothelium are a convergent pathogenic mechanism leading to dysfunction of the endothelial barrier and disease.

Indexed as

Base SequenceCorneal Dystrophies, HereditaryDNA-Binding ProteinsDNA, IntergenicEndothelium, CornealFamilyFemaleGenetic LociHEK293 CellsHumansIntronsMaleModels, GeneticMutationPedigreePromoter Regions, GeneticDNA-Binding ProteinsDNA, IntergenicGRHL2 protein, humanTranscription Factorscorneal dystrophycorneal edemacorneal endotheliumectopic expressionepithelial-to-mesenchymal transitionGRHL2mesenchymal-to-epithelial transitionnon-coding mutationPPCDregulatory region

Identifiers

PMID29499165
PMCPMC5985340
OpenAlexW2792486588

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.