Evidence map›Paper›PMID 29499133›Full record

ArticleMolecular cell2018

Cand1-Mediated Adaptive Exchange Mechanism Enables Variation in F-Box Protein Expression.

Xing Liu, Justin M Reitsma, Jennifer L Mamrosh, Yaru Zhang, Ronny Straube, Raymond J Deshaies

Open access · greenAbstract read
In one paragraph

Article in Molecular cell, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 107 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Geranylgeranylated SCFCell reports · 2024
    Article
  13. Article
  14. Review
  15. Article
  16. Geranylgeranylated-SCFbioRxiv : the preprint server for biology · 2024
    Article
  17. Article
  18. Review
  19. Article
  20. Article

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Xing LiuDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Justin M ReitsmaDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Jennifer L MamroshDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Yaru ZhangDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Ronny StraubeMax Planck Institute for Dynamics of Complex Technical Systems, Sandtorstr. 1, 39106 Magdeburg, Germany. Electronic address: rstraube@mpi-magdeburg.mpg.de.
Raymond J DeshaiesDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA; Howard Hughes Medical Institute, California Institute of Technology, Pasadena, CA 91125, USA; Amgen, One Amgen Center Way, Thousand Oaks, CA 91320, USA. Electronic address: deshaies@caltech.edu.
California Institute of Technology · USAmgen (United States) · USMax Planck Institute for Dynamics of Complex Technical Systems · DE

Funding

Regulation of cullin - RING ubiquitin ligasesR01GM065997 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI DESHAIES, RAYMOND J · 2002 to 2018
$4.5M
Mapping the dynamic assembly of SCF E3 ubiquitin ligases during the cell cycleF32GM112308 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI REITSMA, JUSTIN · 2014 to 2016
$157k
Howard Hughes Medical InstituteNIGMS NIH HHS F32 GM112308NIGMS NIH HHS R01 GM065997
6 · The paper itself

Abstract

Skp1⋅Cul1⋅F-box (SCF) ubiquitin ligase assembly is regulated by the interplay of substrate binding, reversible Nedd8 conjugation on Cul1, and the F-box protein (FBP) exchange factors Cand1 and Cand2. Detailed investigations into SCF assembly and function in reconstituted systems and Cand1/2 knockout cells informed the development of a mathematical model for how dynamical assembly of SCF complexes is controlled and how this cycle is coupled to degradation of an SCF substrate. Simulations predicted an unanticipated hypersensitivity of Cand1/2-deficient cells to FBP expression levels, which was experimentally validated. Together, these and prior observations lead us to propose the adaptive exchange hypothesis, which posits that regulation of the k

Indexed as

F-Box ProteinsGene Expression RegulationModels, BiologicalModels, ChemicalProteolysisTranscription FactorsAnimalsCullin ProteinsMiceNEDD8 ProteinCullin 1Cullin ProteinsF-Box ProteinsNEDD8 ProteinNedd8 protein, mouseTIP120 protein, mouseTranscription FactorsCand1exchange factormathematical modelingSCF cycleubiquitin ligase

Identifiers

PMID29499133
PMCPMC5836512
OpenAlexW2791421524

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.