ArticlePLoS computational biology2018
Classifying dynamic transitions in high dimensional neural mass models: A random forest approach.
Article in PLoS computational biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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Who cites it
10 citing papers in PubMed.
- Sensitivity analysis enlightens effects of connectivity in a Neural Mass Model under Control-Target mode.PLoS computational biology · 2026Article
- Global nonlinear approach for mapping parameters of neural mass models.PLoS computational biology · 2023Article
- Control of epileptic activities in a cortex network of multiple coupled neural populations under electromagnetic induction.Applied mathematics and mechanics · 2023Article
- Predictive neuromodulation of cingulo-frontal neural dynamics in major depressive disorder using a brain-computer interface system: A simulation study.Frontiers in computational neuroscience · 2023Article
- EEG generation mechanism of lower limb active movement intention and its virtual reality induction enhancement: a preliminary study.Frontiers in neuroscience · 2023Article
- What Models and Tools can Contribute to a Better Understanding of Brain Activity?Frontiers in network physiology · 2022Article
- The role that choice of model plays in predictions for epilepsy surgery.Scientific reports · 2019Article
- Classifying Included and Excluded Exons in Exon Skipping Event Using Histone Modifications.Frontiers in genetics · 2018Article
- Global search metaheuristics for neural mass model calibration.Imaging neuroscience (Cambridge, Mass.)Article
- Dynamics-informed priors (DIP) for neural mass modelling.Imaging neuroscience (Cambridge, Mass.)Article
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3 authors.
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Abstract
Neural mass models (NMMs) are increasingly used to uncover the large-scale mechanisms of brain rhythms in health and disease. The dynamics of these models is dependent upon the choice of parameters, and therefore it is crucial to be able to understand how dynamics change when parameters are varied. Despite being considered low dimensional in comparison to micro-scale, neuronal network models, with regards to understanding the relationship between parameters and dynamics, NMMs are still prohibitively high dimensional for classical approaches such as numerical continuation. Therefore, we need alternative methods to characterise dynamics of NMMs in high dimensional parameter spaces. Here, we introduce a statistical framework that enables the efficient exploration of the relationship between model parameters and selected features of the simulated, emergent model dynamics of NMMs. We combine the classical machine learning approaches of trees and random forests to enable studying the effect that varying multiple parameters has on the dynamics of a model. The method proceeds by using simulations to transform the mathematical model into a database. This database is then used to partition parameter space with respect to dynamic features of interest, using random forests. This allows us to rapidly explore dynamics in high dimensional parameter space, capture the approximate location of qualitative transitions in dynamics and assess the relative importance of all parameters in the model in all dimensions simultaneously. We apply this method to a commonly used NMM in the context of transitions to seizure dynamics. We find that the inhibitory sub-system is most crucial for the generation of seizure dynamics, confirm and expand previous findings regarding the ratio of excitation and inhibition, and demonstrate that previously overlooked parameters can have a significant impact on model dynamics. We advocate the use of this method in future to constrain high dimensional parameter spaces enabling more efficient, person-specific, model calibration.
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