Evidence map›Paper›PMID 29498112›Full record

ArticleProtein science : a publication of the Protein Society2018

Phosphorylation control of the ubiquitin ligase Cbl is conserved in choanoflagellates.

Jeanine F Amacher, Helen T Hobbs, Aaron C Cantor, Lochan Shah, Marco-Jose Rivero, Sarah A Mulchand, John Kuriyan

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jeanine F AmacherDepartment of Molecular and Cell Biology, University of California, Berkeley, California.
Helen T HobbsDepartment of Chemistry, University of California, Berkeley, California.
Aaron C CantorDepartment of Molecular and Cell Biology, University of California, Berkeley, California.
Lochan ShahDepartment of Molecular and Cell Biology, University of California, Berkeley, California.
Marco-Jose RiveroDepartment of Molecular and Cell Biology, University of California, Berkeley, California.
Sarah A MulchandDepartment of Molecular and Cell Biology, University of California, Berkeley, California.
John KuriyanDepartment of Molecular and Cell Biology, University of California, Berkeley, California.
University of California, Berkeley · USHoward Hughes Medical Institute · USQB3 · US

Funding

Understand the metabolic fitness of naïve T cellsP01AI091580 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JEROEN ROOSE · 2011 to 2026
$31.1M
MOLECULAR BIOPHYSICS TRAINING GRANTT32GM008295 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI HURLEY, JAMES H, WEMMER, DAVID E · 1989 to 2022
$8.1M
NIAID NIH HHS P01 AI091580NIGMS NIH HHS T32 GM008295
6 · The paper itself

Abstract

Cbl proteins are E3 ubiquitin ligases specialized for the regulation of tyrosine kinases by ubiquitylation. Human Cbl proteins are activated by tyrosine phosphorylation, thus setting up a feedback loop whereby the activation of tyrosine kinases triggers their own degradation. Cbl proteins are targeted to their substrates by a phosphotyrosine-binding SH2 domain. Choanoflagellates, unicellular eukaryotes that are closely related to metazoans, also contain Cbl. The tyrosine kinase complement of choanoflagellates is distinct from that of metazoans, and it is unclear if choanoflagellate Cbl is regulated similarly to metazoan Cbl. Here, we performed structure-function studies on Cbl from the choanoflagellate species Salpingoeca rosetta and found that it undergoes phosphorylation-dependent activation. We show that S. rosetta Cbl can be phosphorylated by S. rosetta Src kinase, and that it can ubiquitylate S. rosetta Src. We also compared the substrate selectivity of human and S. rosetta Cbl by measuring ubiquitylation of Src constructs in which Cbl-recruitment sites are placed in different contexts with respect to the kinase domain. Our results indicate that for both human and S. rosetta Cbl, ubiquitylation depends on proximity and accessibility, rather than being targeted toward specific lysine residues. Our results point to an ancient interplay between phosphotyrosine and ubiquitin signaling in the metazoan lineage.

Indexed as

AnimalsCaenorhabditis elegansChoanoflagellataCrystallography, X-RayDrosophila melanogasterMass SpectrometryModels, MolecularPhosphorylationProto-Oncogene Proteins c-cblProto-Oncogene Proteins c-cblE3 ubiquitin ligaseevolutionprotein-protein interactionsstructure-functiontyrosine kinase signalingubiquitylation

Identifiers

PMID29498112
PMCPMC5916117
OpenAlexW2791546842

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.