Evidence map›Paper›PMID 29496999›Full record

ArticleThe Journal of biological chemistry2018

LysMD3 is a type II membrane protein without an

Christine C Yokoyama, Megan T Baldridge, Daisy W Leung, Guoyan Zhao, Chandni Desai, Ta-Chiang Liu, Vladimir E Diaz-Ochoa, Jeremy P Huynh, Jacqueline M Kimmey, Erica L Sennott and 22 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. The pathobiology of human fungal infections.Nature reviews. Microbiology · 2024
    Review
  2. Article
  3. Article
  4. Dectin-1-Independent Macrophage Phagocytosis ofInternational journal of molecular sciences · 2023
    Article
  5. Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors at 9 institutions in 1 country.

Christine C YokoyamaFrom the Departments of Pathology and Immunology and.
Megan T BaldridgeMedicine, Division of Infectious Diseases, and.
Daisy W LeungFrom the Departments of Pathology and Immunology and.
Guoyan ZhaoFrom the Departments of Pathology and Immunology and.
Chandni DesaiFrom the Departments of Pathology and Immunology and.
Ta-Chiang LiuFrom the Departments of Pathology and Immunology and.
Vladimir E Diaz-Ochoathe Department of Medical Microbiology and Immunology, University of California, Davis, California 95161.
Jeremy P HuynhDepartments of Molecular Microbiology.
Jacqueline M KimmeyDepartments of Molecular Microbiology.
Erica L Sennottthe Department of Microbiology and Immunobiology, Harvard Medical School, Boston, Massachusetts 02115.
Camaron R HoleDepartments of Molecular Microbiology.
Rachel A IdolPediatrics.
Sunmin ParkFrom the Departments of Pathology and Immunology and.
Kelly M StorekGenentech, Inc., South San Francisco, California 95688.
Caihong WangObstetrics and Gynecology, and.
Seungmin Hwangthe Department of Pathology, University of Chicago, Chicago, Illinois 60637.
Ashley Viehmann MilamFrom the Departments of Pathology and Immunology and.
Eric Chenthe Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, California 94720.
Tobias Kerrinnesthe Department of Medical Microbiology and Immunology, University of California, Davis, California 95161.
Michael N Starnbachthe Department of Microbiology and Immunobiology, Harvard Medical School, Boston, Massachusetts 02115.
Scott A HandleyFrom the Departments of Pathology and Immunology and.
Indira U MysorekarFrom the Departments of Pathology and Immunology and.
Paul M AllenFrom the Departments of Pathology and Immunology and.
Denise M Monackthe Department of Microbiology and Immunology, Stanford University, Stanford, California 94305.
Mary C DinauerPediatrics.
Tamara L DoeringDepartments of Molecular Microbiology.
Renee M Tsolisthe Department of Medical Microbiology and Immunology, University of California, Davis, California 95161.
Jonathan E Dworkinthe Department of Microbiology and Immunology, College of Physicians and Surgeons, Columbia University, New York, New York 10032, and.
Christina L StallingsDepartments of Molecular Microbiology.
Gaya K AmarasingheFrom the Departments of Pathology and Immunology and.
Craig A MicchelliDevelopmental Biology, Washington University School of Medicine, Saint Louis, Missouri 63110.
Herbert W VirginFrom the Departments of Pathology and Immunology and virgin@wustl.edu.
Washington University in St. Louis · USUniversity of California Davis Medical Center · USHarvard University · USPediatrics and Genetics · USColumbia University · USOffice of Infectious Diseases · USStanford University · USUniversity of California, Berkeley · USUniversity of Chicago · US

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI AIMEE S JAMES · 2001 to 2026
$128.0M
Genetic and Pathway Analysis CoreU19AI109725 · NIAID · WASHINGTON UNIVERSITY · PI ALLEN, PAUL M · 2014 to 2018
$32.7M
TRAINING PROGRAM IN CELLULAR AND MOLECULAR BIOLOGYT32GM007067 · NIGMS · WASHINGTON UNIVERSITY · PI TRUE-KROB, HEATHER L · 1985 to 2020
$20.4M
Cytotoxic T Cell Mediated Immunity to ChlamydiaR01AI039558 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI STARNBACH, MICHAEL N · 2001 to 2025
$15.6M
TRAINING PROGRAM IN IMMUNOLOGY AND IMMUNOGENETICST32AI007163 · NIAID · WASHINGTON UNIVERSITY · PI Kenneth M Murphy, Kodi S Ravichandran · 1985 to 2026
$14.8M
Infectious Diseases/Basic Microbial Pathogenic MechanismsT32AI007172 · NIAID · WASHINGTON UNIVERSITY · PI Daniel E. Goldberg, JENNIFER A PHILIPS · 1985 to 2026
$13.0M
The EPI-STI Biostatistics and Bioinformatics Core (Cuzick/Wheeler)U19AI113187 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI WHEELER, COSETTE MARIE · 2014 to 2018
$12.6M
Viral Discovery in Rheumatoid ArthritisP30AR048335 · NIAMS · WASHINGTON UNIVERSITY · PI ATKINSON, JOHN · 2001 to 2015
$8.9M
Innate immune sensing of ER stress during bacterial infectionR01AI109799 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI TSOLIS, RENEE M · 2014 to 2024
$3.6M
Molecular Mechanisms of Inflammasome Activation During Salmonella InfectionsR01AI095396 · NIAID · STANFORD UNIVERSITY · PI MONACK, DENISE M · 2012 to 2020
$3.4M
RECOGNITION AND SIGNALING IN POSITIVE SELECTION OF CD4+ T CELLSR01AI024157 · NIAID · WASHINGTON UNIVERSITY · PI ALLEN, PAUL M · 1987 to 2016
$2.5M
HOST FACTORS IN CRYPTOCOCCAL PATHOGENESISR01AI102882 · NIAID · WASHINGTON UNIVERSITY · PI DOERING, TAMARA L · 2013 to 2017
$2.2M
NCI NIH HHS P30 CA091842NIAID NIH HHS F32 AI108089NIAID NIH HHS R01 AI024157NIAID NIH HHS R01 AI039558NIAID NIH HHS R01 AI095396NIAID NIH HHS R01 AI102882NIAID NIH HHS R01 AI109799NIAID NIH HHS T32 AI007163NIAID NIH HHS T32 AI007172NIAID NIH HHS U19 AI109725NIAID NIH HHS U19 AI113187NIAMS NIH HHS P30 AR048335NIDDK NIH HHS R01 DK100644NIGMS NIH HHS T32 GM007067
6 · The paper itself

Abstract

Germline-encoded receptors recognizing common pathogen-associated molecular patterns are a central element of the innate immune system and play an important role in shaping the host response to infection. Many of the innate immune molecules central to these signaling pathways are evolutionarily conserved. LysMD3 is a novel molecule containing a putative peptidoglycan-binding domain that has orthologs in humans, mice, zebrafish, flies, and worms. We found that the lysin motif (LysM) of LysMD3 is likely related to a previously described peptidoglycan-binding LysM found in bacteria. Mouse LysMD3 is a type II integral membrane protein that co-localizes with GM130+ structures, consistent with localization to the Golgi apparatus. We describe here two lines of mLysMD3-deficient mice for

Indexed as

Gene DeletionAnimalsAutoantigensBacterial InfectionsCRISPR-Cas SystemsFemaleImmunity, InnateInflammationMaleMembrane ProteinsMiceMycosesPhylogenyVirus DiseasesAutoantigensGolgin subfamily A member 2Membrane Proteinsanimal modelimmunologyinfectioninflammationmembrane proteinmousemouse geneticsprotein motif

Identifiers

PMID29496999
PMCPMC5912457
OpenAlexW2791133885

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.