Evidence map›Paper›PMID 29494616›Full record

ArticlePloS one2018

Genetic polymorphism and expression of HSF1 gene is significantly associated with breast cancer in Saudi females.

Sahar Almotwaa, Mohamed Elrobh, Huda AbdulKarim, Mohamed Alanazi, Sooad Aldaihan, Jilani Shaik, Maha Arafa, Arjumand Sultan Warsy

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Sahar AlmotwaaDepartment of Biochemistry, College of Science, King Saud University, Riyadh, Saudi Arabia.
Mohamed ElrobhDepartment of Biochemistry, College of Science, King Saud University, Riyadh, Saudi Arabia.
Huda AbdulKarimHead of the Hematology/Oncology Unit at King Fahad Medical City Hospital, Comprehensive Cancer Center, Riyadh, Saudi Arabia.
Mohamed AlanaziDepartment of Biochemistry, College of Science, King Saud University, Riyadh, Saudi Arabia.
Sooad AldaihanDepartment of Biochemistry, College of Science, King Saud University, Riyadh, Saudi Arabia.
Jilani ShaikGenome Research Chair, Department of Biochemistry, College of Science, King Saud University, Riyadh, Saudi Arabia.
Maha ArafaDepartment of Pathology, College of Medicine, King Saud University, Riyadh, Saudi Arabia.
Arjumand Sultan WarsySenior Scientist, Central Laboratory, Center for Science and Medical Studies for Girls, King Saud University, Riyadh, Saudi Arabia.ORCID 0000-0001-6957-203X
King Saud University · SAKing Fahd Medical City · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcription factor, heat shock factor 1 (HSF1), influences the expression of heat shock proteins as well as other activities like the induction of tumor suppressor genes, signal transduction pathway, and glucose metabolism. We hypothesized that single nucleotide polymorphisms (SNPs) in HSF1 gene might affect its expression or function which might have an influence on the development of breast cancer. The study group included 242 individuals (146 breast cancer patients and 96 healthy controls). From the cancer patients, genomic DNA was extracted from 96 blood samples and 50 Formalin-Fixed Paraffin Embedded (FFPE) tissues, while from the controls DNA were extracted from blood only. Genotype was carried out for four SNPs in the HSF1 gene (rs78202224, rs35253356, rs4977219 and rs34404564) using Taqman genotyping assay method. The HSF1 expression was investigated using immunohistochemistry on FFPE tissues (cancer tissue and adjacent normal tissue). The SNP rs78202224 (G>T) was significantly associated with increased risk of breast cancer. The combined TT + GT genotype (OR: 6.91; p: 0.035) and the T allele showed high risk (OR: 5.81; p:0.0085) for breast cancer development. The SNP rs34404564 (A>G) had a protective effect against the development of breast cancer. The genotype AG (OR: 0.41; p = 0.0059) and GG+AG (OR: 0.52; p: 0.026) occurred at a significantly lower frequency in the breast cancer patients compared to the frequency in healthy controls. No significant relationship was identified between either rs35253356 (A>G) or rs4977219 (A>C) and breast cancer in Saudi. The HSF1 protein expression was higher in all invasive and in situ breast carcinoma compared to the normal tissue. A stronger positive staining for HSF1 was found in the nucleus compared to the cytoplasm. Our results show that HSF1 gene expression is elevated in breast cancer tissue and two of the studied SNPs correlate significantly with cancer development.

Indexed as

Polymorphism, Single NucleotideBreastBreast NeoplasmsFemaleGene Expression Regulation, NeoplasticGenetic Predisposition to DiseaseGenotypeHeat Shock Transcription FactorsHumansMiddle AgedSaudi ArabiaHeat Shock Transcription FactorsHSF1 protein, human

Identifiers

PMID29494616
PMCPMC5832201
OpenAlexW2793440490

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.