Evidence map›Paper›PMID 29492777›Full record

ArticleBiodegradation2018

Contaminant concentration versus flow velocity: drivers of biodegradation and microbial growth in groundwater model systems.

Michael Grösbacher, Dominik Eckert, Olaf A Cirpka, Christian Griebler

Open access · hybridAbstract read
In one paragraph

Article in Biodegradation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 41 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Michael GrösbacherHelmholtz Zentrum München - German Research Center for Environmental Health, Institute of Groundwater Ecology, Ingolstädter Landstrasse 1, 85764, Neuherberg, Germany.
Dominik EckertCenter for Applied Geoscience, University of Tübingen, Hölderlinstrasse 12, 72074, Tübingen, Germany.
Olaf A CirpkaCenter for Applied Geoscience, University of Tübingen, Hölderlinstrasse 12, 72074, Tübingen, Germany.
Christian GrieblerHelmholtz Zentrum München - German Research Center for Environmental Health, Institute of Groundwater Ecology, Ingolstädter Landstrasse 1, 85764, Neuherberg, Germany. griebler@helmholtz-muenchen.de.ORCID 0000-0002-8602-581X
Helmholtz Zentrum München · DEIngenieurgesellschaft für Technische Software (Germany) · DEUniversity of Tübingen · DE

Funding

Deutsche Forschungsgemeinschaft Ci-26/9-1.Deutsche Forschungsgemeinschaft GR 2107/3-1
6 · The paper itself

Abstract

Aromatic hydrocarbons belong to the most abundant contaminants in groundwater systems. They can serve as carbon and energy source for a multitude of indigenous microorganisms. Predictions of contaminant biodegradation and microbial growth in contaminated aquifers are often vague because the parameters of microbial activity in the mathematical models used for predictions are typically derived from batch experiments, which don't represent conditions in the field. In order to improve our understanding of key drivers of natural attenuation and the accuracy of predictive models, we conducted comparative experiments in batch and sediment flow-through systems with varying concentrations of contaminant in the inflow and flow velocities applying the aerobic Pseudomonas putida strain F1 and the denitrifying Aromatoleum aromaticum strain EbN1. We followed toluene degradation and bacterial growth by measuring toluene and oxygen concentrations and by direct cell counts. In the sediment columns, the total amount of toluene degraded by P. putida F1 increased with increasing source concentration and flow velocity, while toluene removal efficiency gradually decreased. Results point at mass transfer limitation being an important process controlling toluene biodegradation that cannot be assessed with batch experiments. We also observed a decrease in the maximum specific growth rate with increasing source concentration and flow velocity. At low toluene concentrations, the efficiencies in carbon assimilation within the flow-through systems exceeded those in the batch systems. In all column experiments the number of attached cells plateaued after an initial growth phase indicating a specific "carrying capacity" depending on contaminant concentration and flow velocity. Moreover, in all cases, cells attached to the sediment dominated over those in suspension, and toluene degradation was performed practically by attached cells only. The observed effects of varying contaminant inflow concentration and flow velocity on biodegradation could be captured by a reactive-transport model. By monitoring both attached and suspended cells we could quantify the release of new-grown cells from the sediments to the mobile aqueous phase. Studying flow velocity and contaminant concentrations as key drivers of contaminant transformation in sediment flow-through microcosms improves our system understanding and eventually the prediction of microbial biodegradation at contaminated sites.

Indexed as

Models, TheoreticalRheologyAerobiosisBacteriaBiodegradation, EnvironmentalComputer SimulationGeologic SedimentsGroundwaterPseudomonas putidaRhodocyclaceaeTolueneWater Pollutants, ChemicalTolueneWater Pollutants, ChemicalAromatic hydrocarbonsAromatoleum aromaticum EbN1BiodegradationGroundwaterNatural attenuationPseudomonal putida F1

Identifiers

PMID29492777
PMCPMC5943387
OpenAlexW2793547989

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.