Evidence map›Paper›PMID 29491391›Full record

ArticleScientific reports2018

Disruption of the open conductance in the β-tongue mutants of Cytolysin A.

Monifa A Fahie, Lucas Liang, Alzira R Avelino, Bach Pham, Patanachai Limpikirati, Richard W Vachet, Min Chen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Monifa A FahieMolecular and Cellular Biology Program, University of Massachusetts Amherst, Amherst, MA, 01003, USA.
Lucas LiangDepartment of Chemistry, University of Massachusetts Amherst, Amherst, MA, 01003, USA.
Alzira R AvelinoMolecular and Cellular Biology Program, University of Massachusetts Amherst, Amherst, MA, 01003, USA.
Bach PhamDepartment of Chemistry, University of Massachusetts Amherst, Amherst, MA, 01003, USA.
Patanachai LimpikiratiDepartment of Chemistry, University of Massachusetts Amherst, Amherst, MA, 01003, USA.
Richard W VachetMolecular and Cellular Biology Program, University of Massachusetts Amherst, Amherst, MA, 01003, USA.
Min ChenMolecular and Cellular Biology Program, University of Massachusetts Amherst, Amherst, MA, 01003, USA. mchen1@chem.umass.edu.
University of Massachusetts Amherst · US

Funding

CHEMISTRY-BIOLOGY INTERFACE PREDOCTORAL TRAINING GRANTST32GM008515 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI THOMPSON, LYNMARIE K. · 1995 to 2020
$4.3M
Transmission Electron Microscope for Core EM FacilityS10RR027897 · NCRR · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI CRAIG, ROGER W · 2009 to 2009
$500k
NCRR NIH HHS S10 RR027897NIGMS NIH HHS T32 GM008515
6 · The paper itself

Abstract

Cytolysin A (ClyA) is a water-soluble alpha pore-forming toxin that assembles to form an oligomeric pore on host cell membranes. The ClyA monomer possesses an α-helical bundle with a β-sheet subdomain (the β-tongue) previously believed to be critical for pore assembly and/or insertion. Oligomerization of ClyA pores transforms the β-tongue into a helix-turn-helix that embeds into the lipid bilayer. Here, we show that mutations of the β-tongue did not prevent oligomerization or transmembrane insertion. Instead, β-tongue substitution mutants yielded pores with decreased conductance while a deletion mutation resulted in pores that rapidly closed following membrane association. Our results suggest that the β-tongue may play an essential structural role in stabilizing the open conformation of the transmembrane domain.

Indexed as

MutationAmino Acid SequenceHemolysisLipid BilayersModels, MolecularPerforinPorosityProtein Conformation, beta-StrandProtein MultimerizationProtein Structure, QuaternaryLipid BilayersPerforin

Identifiers

PMID29491391
PMCPMC5830503
OpenAlexW2797936967

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.